| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2202 |
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| Symbol | |
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| ID | 4279114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2633243 |
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| End bp | 2635387 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134997 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_750886 |
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| Protein GI | 114563373 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.113523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTGA CAAATAAAGT AATGCAAACC ATTAAATTAA ATACTAATTC CCCATGGGTT
TACTCATCAA TTGCATTGGC TATAATGTTT GCTATTACAC AACCAGTGAT GGCTGAACAG
TATGATAAGC GAAATAGTGA AGGCATTGAG CGGGTTGAAG TACATGGACA AGCGGCCAAT
AACGATTTAC TCGGTTCTGC CCAAAACTTA TTAAATAAAC AAGGTGTAGA TTTTTCTGAA
GCGGGTGGCG TATCTGCATT ACCGATTTTA AATGGCATGA TGGGCGATCG GATCAAAGTG
CTCATTGATG GCAGCGACAT TACGTCATCA TGTGCAAACC AGATGAACCC GCCACTTTCA
TATGTGTCAG CCAATCAAAT TAGTTCGACC CAAGTGGTTG CTGGAGTCTC TCCGGTGAGC
GCCGGTGGCG ATAACATTGC AGGCGTAATT AACGTCACTA GCTTAACCCC TGTATTTACC
GATAGCGACA CAGTGACATG GCAAAGTGGT AACATATCTA GCGGTTATCG AAGCACCAAT
GACGCCATTC TCGCAGGTGT AAATGCCACT GTTGCTAGTA AAACATTAAG CTTTAATTAC
CAAGGATCAT TTGAAGATGC AAACAGCTAT ACAGATGCCC ATGGCGATAA AGTACTAGAC
ACTTTATACC AATCACAAAA TCATGCATTA ACCGCTGCTT GGCAAGATGA CATTCAACAA
GTTGCTGTCA AATTGACTCA TCAACATATC CCCTTTCAAG GTTTTGCAAA CCAGTATATG
GACATGACGA ATAATGACAG TTATGGCGCA TTAGTACGTT ATCAACGAAC ACTTGAAAAC
GAAGGCGAGT TCACAGCCCA AGCAAACTGG CACAATGTAG AGCATCAAAT GGGCTTCTTT
ACCGATGAAA AAACCGGCAT GATGCCAATG AAAACTAAGG GTAAAGATTA CAGTTACCAA
CTGCATTGGC AGCTACCAAT GAGCTCAGAC AGCACCTTAT TAATTGGCCA AGAATATTAT
GTTTATCAAC TTGATGATAC ATGGCCTGCG ATTGAAGGTT CAGCCATGAT GGGTCCCAAT
GACTATGTCA ATATTAATGG TGGCGAACGC CAACGTGCAG CTCTTTATGC CGAGTGGCAA
CAAACAATGA ATACACGTTG GTGGCTGTCT GCAGGTGTTC GTTATGAATA CGTATCAACC
AGCACAGGTG AGGTTCAGCC TTATAACACC ATGAGCATGA TGGGCATGAC CAATGTTAAT
GCCATAGCCG CAGATGAATT TAATGGCCTC TATCGAAAGC GCAATGACAA TAACATCGAT
GCCACCCTTC TAGCTCGCTA TCAACTCAGT GATACTGAAG TGATAGAGCT TGGTTTAGCC
CAAAAGAACC GCGCACCCAA TTTATATGAG CGATACAGTT GGGGCCAAAG CACCATGGCC
ACAACGATGA TTGGCTGGTA TGGCGATGCA AACGGCTACA TAGGCAACCC AGACCTTAGT
GCAGAAACTG CACATACATT GAGTATGGCT TACAAGCTAG TACAAGATGA TTTAGCATTT
AGTGCAACAG CTTGGTACAG CAGCATTAAC GATTTTATTG ATGCCAATGT GGTCAGCAGC
TTTAATCGCA CAAGCATCGA TACTAATAGT CGTCATATTT TACAGTTTAC AAATGTCGAC
GCCACCCTGT TTGGTGCACG CATTGATGCT GAATATCAAC TAGCAGACAA TGACACGGGT
AAATGGCGCT TTAACGCTAA CATCAACGCA ACTCGCGGCG AAAGAGATGA CAATGACCAG
CCGCTGTATC AAATAAAACC TTTGCAAACA GAGCTAGCTT TGCAACAACA GCTAGGTGAT
TGGCAAAATA GGTTCAGTTG GCAATGGGTT GCAAGTAAAG ATCGCGTGGA TGAACAGCGT
TTAGAAAACA CAACTGACAG TTACTCACTG CTTAATTTAA GCAGCAGTAT CCAATGGCAT
GATGCCACAA TGACTATTGC AGTGAAAAAT CTACTGGATG AGTATTATCA ACTGCCTCTG
GGCGGTGTCA GTATCGCTGA ATATAAGGCT GACAGCAGTA ACGGTTTTCA ACAAATAGCC
GGTTCGGGTC GCTCACTGGA GCTCAATGTC AATTACGTAT TCTAG
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| Protein sequence | MTLTNKVMQT IKLNTNSPWV YSSIALAIMF AITQPVMAEQ YDKRNSEGIE RVEVHGQAAN
NDLLGSAQNL LNKQGVDFSE AGGVSALPIL NGMMGDRIKV LIDGSDITSS CANQMNPPLS
YVSANQISST QVVAGVSPVS AGGDNIAGVI NVTSLTPVFT DSDTVTWQSG NISSGYRSTN
DAILAGVNAT VASKTLSFNY QGSFEDANSY TDAHGDKVLD TLYQSQNHAL TAAWQDDIQQ
VAVKLTHQHI PFQGFANQYM DMTNNDSYGA LVRYQRTLEN EGEFTAQANW HNVEHQMGFF
TDEKTGMMPM KTKGKDYSYQ LHWQLPMSSD STLLIGQEYY VYQLDDTWPA IEGSAMMGPN
DYVNINGGER QRAALYAEWQ QTMNTRWWLS AGVRYEYVST STGEVQPYNT MSMMGMTNVN
AIAADEFNGL YRKRNDNNID ATLLARYQLS DTEVIELGLA QKNRAPNLYE RYSWGQSTMA
TTMIGWYGDA NGYIGNPDLS AETAHTLSMA YKLVQDDLAF SATAWYSSIN DFIDANVVSS
FNRTSIDTNS RHILQFTNVD ATLFGARIDA EYQLADNDTG KWRFNANINA TRGERDDNDQ
PLYQIKPLQT ELALQQQLGD WQNRFSWQWV ASKDRVDEQR LENTTDSYSL LNLSSSIQWH
DATMTIAVKN LLDEYYQLPL GGVSIAEYKA DSSNGFQQIA GSGRSLELNV NYVF
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