| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2201 |
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| Symbol | |
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| ID | 4279113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2630679 |
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| End bp | 2632679 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134996 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_750885 |
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| Protein GI | 114563372 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATC CAAACCGTCG TCAAACTCGA GCTAACGCTC AACAATTTAT TGATACCCTT
AAACCGTTAC AACATCCTAA CTCGGAAAAA GTCTATTTAG CGGGTAGTCG TGCTGATATC
AACGTTGCTA TGCGTCAAGT TAATCAAACT GATACCGTTA TTGGTGGTAC CGACGCTGAA
CCCATTAAAC AAGCCAATCC GCCGATCATG GTTTATGACT GCGCGGGTGC TTATTCTGAT
CCCCTTGCTG ATATCAATGT GCGTGAAGGC TTACCTAAAA TCCGTCAAGC ATGGATTGAT
GAGCGACAAG ATACTGAGCA ATTAACGGGT GCAAGTTCGG GTTTTACCCA ACAACGACTG
GCCGACGATG GACTCGATCA TTTACGATTT GACGCCTTAG TCGCGCCTAA ACGTGCCAAG
AAGGGCAAAT GCGTGACCCA AATGTATTAT GCACGCCAAG GTATTATTAC CCCTGAAATG
GAATACATTG CCATTCGTGA AAACATGGCT CGCGCTGAAG TAACCGATAG CGTGTTGACT
CAAAAAGCCC CAGGTGAGAA TTTTGGTGCA CATATTGGGC AACTTATCAC TCCTGAGTTT
GTCCGCGATG AAGTCGCCCG AGGTCGAGCA ATTATTCCGC TGAATATTAA CCATCCTGAA
ACTGAACCTA TGATTATTGG GCGTAATTTT TTGGTGAAGG TGAATGCCAA TATTGGTAAT
TCGGCGGTGA CATCTTCGAT TGAAGAAGAA GTTGAAAAAC TCGTGTGGTC TACCCGTTGG
GGCGCCGATA CGGTCATGGA TTTGTCGACT GGACGTTATA TTCATGAAAC GCGTGAGTGG
CTTATCCGTA ATTCGCCTGT GCCGATTGGT ACTGTGCCGA TTTATCAAGC ATTAGAAAAG
GTTAATGGCG TTGCCGAAGA CCTCAGTTGG GCGGTATTTA GAGATACATT GATTGAACAA
GCCGAGCAGG GCGTAGACTA TTTTACGATT CATGCAGGGG TGTTATTGCG TTATGTACCC
ATGACCGCCA AACGCCTTAC CGGCATTGTG TCGCGTGGCG GTTCAATTAT GGCTAAGTGG
TGTTTAAGTC ATCATCAAGA AAGTTTCTTA TATGAACATT TTCGCGATAT TTGCCAAATT
TGCGCCCAAT ACGATGTGTC GTTGTCGTTA GGGGATGGTA TGCGCCCCGG TTCAATTGCC
GACGCCAATG ATGAAGCGCA ATTTGCGGAA TTAGAAACCT TAGGTGAATT GGTCAAAATT
GCATGGGAAT ACGATGTGCA GACCATCATC GAAGGCCCAG GTCATGTGCC AATGCAATTG
ATTAAAGTCA ATATGGAAAA GCAATTGGCC CTTTGTGATG AAGCGCCATT TTATACATTA
GGCCCACAAA CAACCGATAT TGCGCCTGGC TATGATCACT TCACCTCAGG TATTGGTGCT
GCCATGATGG CTTGGTACGG CGTGGCGATG TTGTGTTACG TCACCCCTAA AGAACACTTA
GGTTTGCCTA ACAAAGAAGA TGTAAAACAA GGCTTAATTG CCTACAAGAT TGCTGCCCAT
GCTGCGGATG TCGCTAAAGG TCATCCAGGT GCGCAAGTAC GTGATAATGC ATTATCAAAA
GCCCGCTTTG AATTCCGTTG GGAAGATCAA TATAACCTAG GTCTTGATCC TGATACCGCT
CGTGCTTACC ACGACGAATC GTTACCACAA GAATCAGCCA AAGTGGCTCA TTTTTGTTCA
ATGTGTGGGC CTAAATTCTG TTCGATGAAA ATAACCCACG AAGTACGTGA ATATGCCGCG
AATCTTGAAC AAGCTGAAGC ACTTAAGATT GAAGTATCTT CTGCTAGTGC TTATCAAGCT
CTACATACGG CTCAAGCCAT AAATCCGTCC GAAGCGATGG CGCAAAAGTC GGCAGAGTTC
AAAGCGTCGG GCTCGGCGCT TTATCACGAC GTCAAACCCG CAGCACAAGT TAATACTGAC
TTAACGGTAG AGGTTGAATA A
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| Protein sequence | MSNPNRRQTR ANAQQFIDTL KPLQHPNSEK VYLAGSRADI NVAMRQVNQT DTVIGGTDAE
PIKQANPPIM VYDCAGAYSD PLADINVREG LPKIRQAWID ERQDTEQLTG ASSGFTQQRL
ADDGLDHLRF DALVAPKRAK KGKCVTQMYY ARQGIITPEM EYIAIRENMA RAEVTDSVLT
QKAPGENFGA HIGQLITPEF VRDEVARGRA IIPLNINHPE TEPMIIGRNF LVKVNANIGN
SAVTSSIEEE VEKLVWSTRW GADTVMDLST GRYIHETREW LIRNSPVPIG TVPIYQALEK
VNGVAEDLSW AVFRDTLIEQ AEQGVDYFTI HAGVLLRYVP MTAKRLTGIV SRGGSIMAKW
CLSHHQESFL YEHFRDICQI CAQYDVSLSL GDGMRPGSIA DANDEAQFAE LETLGELVKI
AWEYDVQTII EGPGHVPMQL IKVNMEKQLA LCDEAPFYTL GPQTTDIAPG YDHFTSGIGA
AMMAWYGVAM LCYVTPKEHL GLPNKEDVKQ GLIAYKIAAH AADVAKGHPG AQVRDNALSK
ARFEFRWEDQ YNLGLDPDTA RAYHDESLPQ ESAKVAHFCS MCGPKFCSMK ITHEVREYAA
NLEQAEALKI EVSSASAYQA LHTAQAINPS EAMAQKSAEF KASGSALYHD VKPAAQVNTD
LTVEVE
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