| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2196 |
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| Symbol | thiH |
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| ID | 4279108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2626048 |
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| End bp | 2627163 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134991 |
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| Product | thiamine biosynthesis protein ThiH |
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| Protein accession | YP_750880 |
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| Protein GI | 114563367 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.119873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTATT CAAGCGTATT TGCGCAATTA GCCCCCGAAG CATTATCGAT GAAGTTGTAT
TCAACAACCG CCAAAGACGT TGAGTTGGCT TTGAAAAATC CAAGCGGTAA TCTTGATAGC
TTGTTGGCAT TATTATCTCC TGCCGCAATG CCATACATTG AACCGATGGC GAAGCAAGCA
GCTCAGCTGA CTCGGCAGCG ATTTGGTGCA AATATCGGCC TTTTCTTACC CTTATATTTA
TCAAACTTGT GCGCCAATGA GTGCGATTAT TGTGGATTTA GTATGAGCAA TAAGGTCAAG
CGCAAAACTC TTACTCGTGA TGAACTAGCA GCGGAAATGG CGATTATTAA ACAACGTGGC
TTTGATTCGA TATTATTGGT GTCTGGCGAA CACGAAACTA AAGTTGGAAT GGAGTATTTT
GAGTCGGTGC TACCGTTAGT TAGCAGGGCT TTTAATTACG TGGCAATGGA AGTGCAACCA
TTGGAGACTG ATCAGTATCA GCGTCTTGGC AAACTAGGTG TTGATGCCGT TATGGTATAC
CAAGAAACAT ATCGTGCTCA TACTTATGCT CAGCATCATA CTCGCGGTAA AAAACAAGAT
TTTATCTATC GCTTAGATAC CCCTGATCGA GTGGCAAAAT CGGGTATCGA TAAAATTGGC
CTCGGGGTAT TACTTGGGTT AGATGATTGG CGCTTAGATG CATTACTTAT GGGCTTTCAT
CTAGATTACT TGGAAAATAC CTACTGGCGC AGTCGCTACA GTATTTCACT ACCTCGTTTA
CGTCCATGTA CTGGCGGCAT TACACCGAAA GTTGAATTAA CCGATGCAGG ATTAGTACAA
ATGATCTGTG CATTTAGGTT GTTTAACCCC CAGCTTGAAA TCAGTTTATC CACGCGAGAG
TTACCATCAT TAAGGGATAA TTTACTCCCT TTAGGAATTA CCCACATGAG TGCAGGCAGT
TCAACTCAAC CAGGCGGTTA TATGGCGCCA GACAGCCAAC TTGATCAATT TGAAATCAGT
GATAACCGCC CAGTAGAGCA AGTTGTTGAA CAAATGAAGC GACGAGGAAT TAATCCAGTA
TGGAAAGATT GGGAGATGGG TTGGGTTAAC AGCTAA
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| Protein sequence | MTYSSVFAQL APEALSMKLY STTAKDVELA LKNPSGNLDS LLALLSPAAM PYIEPMAKQA
AQLTRQRFGA NIGLFLPLYL SNLCANECDY CGFSMSNKVK RKTLTRDELA AEMAIIKQRG
FDSILLVSGE HETKVGMEYF ESVLPLVSRA FNYVAMEVQP LETDQYQRLG KLGVDAVMVY
QETYRAHTYA QHHTRGKKQD FIYRLDTPDR VAKSGIDKIG LGVLLGLDDW RLDALLMGFH
LDYLENTYWR SRYSISLPRL RPCTGGITPK VELTDAGLVQ MICAFRLFNP QLEISLSTRE
LPSLRDNLLP LGITHMSAGS STQPGGYMAP DSQLDQFEIS DNRPVEQVVE QMKRRGINPV
WKDWEMGWVN S
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