| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2190 |
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| Symbol | |
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| ID | 4279102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2619001 |
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| End bp | 2619957 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134985 |
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| Product | alpha-L-glutamate ligase-like protein |
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| Protein accession | YP_750874 |
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| Protein GI | 114563361 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR02291] alpha-L-glutamate ligase-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0104354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTACG CCTGGCCCTG GGAATTGAGC CGTAGCGGTG TACTCAACAT GAACAGGCGC
AATATTAGCT ATATTGGTCG TTATAATCAG CGTAAGTTTT ATAAACGCGT TGATGACAAA
CTAATTACTA AGCAACTTGC GCTTGCTAAT GGCATTGCGG TTCCCGATTT AATTGGGGTT
GTTCATGAAC AACATAAAAT CCAAGAAATT CCAGCTATGG TTCTTGACCG TAGCGGTTTT
GTCATAAAAC CGGCAAAAGG TTCTGGCGGT AAAGGCATTA TGGTAATAAC CAGAGTGAGC
AATGGCTGTT ATTACAAGCC CAATGGCCAC GAAGTGACTC ATAGTGAAAT TTATCGTCAT
GTATCTAACA TTTTAAGTGG TTTATTCTCA CTCGGCGGTA AGCCTGATGT CGCGATTGTT
GAAGGACTAA TTGAATTTGA TCCAGTCTTT GAAGGCTTAA GTTATGAAGG TGTCCCTGAC
ATCCGCTTAA TTGTGTTTAA AGGCTTTCCT GTCATGGGAA TGTTACGTTT ATCAACTGCT
GCATCTGATG GTAAAGCAAA TTTACACCAA GGCGCTGTAG GTGTGGGTTT GGATATCGCT
ACCGGAAGCA GTTTGCATGC TGTGCAATTT GATTTACCCG TTGATAAGCA TCCTGATACT
CATTTTCCAC TGTCGAACAT CAAAGTTCCT CATTGGGAAA CCTTACTCCA CACGGCATCG
AGTGCCTACG AAATGTGCGA GTTAGGGTAT TTAGGTACTG ACATGGTGTT AGATAAAAAC
AAAGGCCCAC TGCTACTTGA ATTGAATGCC CGACCAGGTC TAACAATTCA AATTGCCAAC
GGTAGAGGGA TTTTACCTCG ACTTAAGCAT GTCGAAGCGA TGAAAAGCTC AACAATGTCA
GTTGAGGAAC GCGTGGCTTA TGCTAAAAAG CATTTTTGTA GCAACCCTAT TTTTTAA
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| Protein sequence | MKYAWPWELS RSGVLNMNRR NISYIGRYNQ RKFYKRVDDK LITKQLALAN GIAVPDLIGV
VHEQHKIQEI PAMVLDRSGF VIKPAKGSGG KGIMVITRVS NGCYYKPNGH EVTHSEIYRH
VSNILSGLFS LGGKPDVAIV EGLIEFDPVF EGLSYEGVPD IRLIVFKGFP VMGMLRLSTA
ASDGKANLHQ GAVGVGLDIA TGSSLHAVQF DLPVDKHPDT HFPLSNIKVP HWETLLHTAS
SAYEMCELGY LGTDMVLDKN KGPLLLELNA RPGLTIQIAN GRGILPRLKH VEAMKSSTMS
VEERVAYAKK HFCSNPIF
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