| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2189 |
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| Symbol | |
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| ID | 4279101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2617493 |
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| End bp | 2619001 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134984 |
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| Product | gonadoliberin III-related protein |
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| Protein accession | YP_750873 |
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| Protein GI | 114563360 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00173239 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCTC GTAAACCGTT TTACATATTC GTTGCGTTGC TATTTATCAT TGGTATTAGC
ACCAGCATAT ATCGTGGTGT TGAACACAAT GTGCCTTTTT TACCTGGTGA ACAGGTACAA
AGCTGGGCTG TGGATGCCAA AATCAGTTTT AATGGAACGA ATCAACCTGC TGAGGTCAAT
TTCTCATTAC CGAACGATCC TGCATTTGAC ATCTTAGTTG AAAATGCATC ATCACCAGGT
TATGGCTTAA ATATTTCAGC TGATGCCCAT AATCGTCGCG CAGTATGGTC AATACGTGAT
GCTTCTGGCT CACAAGCATT ATATTACCGA GTGACTTTAG TACCGACAGG CAAGCTTAAT
ATTGAAGCTG TCGAAGAACC TGCCACGCCA GAATTATATT CATGGCCTGC AACAGAAAAA
TCAGCAGCAG AGCAAGTCAT TGAAGAAGTA TGGGCTCGCA GTGCGACTAA TCTATCGTTT
GCTCAACAAT TGATGAATTT GATTAACGAT AACGATCAAA GCCAGAATAT GGCGTTGTTA
TTATCTGCTA ATACTTCAAC CAATTTGTTT GTACGCATGT TGCATTCAAA AGGTGTCCCT
GCACGTATCG TTAATGGTTT GCAACTTGAA GATCAGCGAC GTCGTCAACA GCTTACATCA
TATGTTCAAG TTTATAATGA TGGGGCATGG GAGCTTTTTG ACGTTCCAAA CAACAAAAAA
GGCCGTGATA ATACCCTAGT GCTATGGGAA TATACTGGTC ACTCTGTGCT TGATGTCATG
GGAGGAAATA ATTCATTAGT TAATTTCTCA ATGCTACAAG ATACTCGTTC AGCATTAGCA
ACATCTATCG ACATGATGAT GAATGACGAT GCATGGGATT TCTCCCTATA TCAGTTACCA
CTTGAAGAAC AAAGCACCTT TAAAGGCATT CTATTAATCC CAATCGGCGT ATTAGTCGTG
GTGTTTTTAC GTGTCATTGT TGGCATCAAA ACATCAGGTA CCTTTATGCC TGTTTTGATT
GCGCTAGCGT TCATCCAAAC TACCCTATTA ACTGGCTTAA TCGGTTTTTT ATTGATTGTT
GCCTTTGGTT TAATGATCCG TTCCTATCTG TCCACACTCA ACTTACTGCT CATATCCCGA
ATATCGGCGG TCATTATCGT GGTGATTTTT ATTATCGGCT TGTTTACCTT AATTTCATTC
AAGTTAGGTT TAAGTGAAGG ATTAACCATT ACCTTCTTCC CGATGATCAT TCTTGCCTGG
ACTATTGAAC GTATGTCTAT TCTGTGGGAA GAAGAAGGTC CTAAAAAAGT CTTTGTATCG
GGTGGCGGTA GCTTATTTGT GGCGACATTG GCGTACTTAG CTATGGACAA CCAATTAGTT
CAACATTGGG TATTCAACTT CTTAGGCATT CATTTAGTGA TTTTAGCCTT GGTATTAGTG
ATGGGACAGT ACACTGGTTA CCGTTTAACT GAGCTAAAAC GCTTTAAACC ATTAGTTGGA
GAGCAATAA
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| Protein sequence | MHSRKPFYIF VALLFIIGIS TSIYRGVEHN VPFLPGEQVQ SWAVDAKISF NGTNQPAEVN
FSLPNDPAFD ILVENASSPG YGLNISADAH NRRAVWSIRD ASGSQALYYR VTLVPTGKLN
IEAVEEPATP ELYSWPATEK SAAEQVIEEV WARSATNLSF AQQLMNLIND NDQSQNMALL
LSANTSTNLF VRMLHSKGVP ARIVNGLQLE DQRRRQQLTS YVQVYNDGAW ELFDVPNNKK
GRDNTLVLWE YTGHSVLDVM GGNNSLVNFS MLQDTRSALA TSIDMMMNDD AWDFSLYQLP
LEEQSTFKGI LLIPIGVLVV VFLRVIVGIK TSGTFMPVLI ALAFIQTTLL TGLIGFLLIV
AFGLMIRSYL STLNLLLISR ISAVIIVVIF IIGLFTLISF KLGLSEGLTI TFFPMIILAW
TIERMSILWE EEGPKKVFVS GGGSLFVATL AYLAMDNQLV QHWVFNFLGI HLVILALVLV
MGQYTGYRLT ELKRFKPLVG EQ
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