| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2184 |
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| Symbol | aspS |
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| ID | 4279096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2609808 |
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| End bp | 2611583 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134979 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_750868 |
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| Protein GI | 114563355 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGTC ATTATTGTGG AGACATTAAT CAGTCTCATC TAGGTCAAGA AGTTACTTTA
GTCGGTTGGG TCAACCGTAG TCGAGATTTA GGCGGAGTTG TTTTTTTAGA CTTACGCGAT
AGAGAAGGGC TAGTACAAGT TGTTTATGAC CCAGATCTAA AAGATGTTTT TGAAATGGCA
AGCACATTGC GCAGTGAATT TTGTGTTCAA ATAAAAGGTG TTGTTCGCGC TCGTCCAGAA
AGCCAAATCA ATTCACAAAT GAAAACTGGT GAAATTGAGA TTTTGGGTAA GCAACTGACC
ATTATTAATG CGTCAGCTCC TTTACCATTA AGCATGGATA ACTATCAAAA CAATAGTGAA
GAACAACGTT TAAAATACCG TTATTTAGAT TTACGTCGTC CAGAAATGGC CGAGCGCCTT
ATTTTTCGCG CAAAAGTGAC CAGCTCAGTC CGTCGCTTTT TAGACGGCAA TGGCTTTTTA
GATATCGAAA CGCCTATTTT GACTAAAGCC ACTCCAGAAG GTGCGCGTGA CTATTTAGTG
CCAAGTCGAA CTTATAAAGG TCAATTTTTT GCTTTGCCTC AATCACCACA GTTGTTCAAA
CAGTTGTTGA TGATGTCTGG TTTTGATCGC TATTATCAAA TCGTAAAATG CTTCCGTGAT
GAAGATTTAC GTGCAGATCG TCAGCCTGAA TTTACTCAAA TCGATATTGA AACCTCATTC
ATGTCTGCCG AACAAGTCAT GGAAAAAACT GAACAAATGA TGCGCGGTTT ATTTCAAGAT
TTATTGAATG TAGATTTAGG TGATTTTCCT CGTATGACCT ACGCCGAAGC AATGAAGCGT
TATGGTTCAG ATAAACCTGA TTTACGTAAT CCACTTGAAT TAGTTGATAT TGCTGATTTG
GTTAAAGATG TTGAATTTGC GGTATTTAAT GGCCCTGCAA ATGATGTTGA AGGTCGCGTT
GCGGCACTTC GTATTCCAAC TGGTGCATCT TTATCTCGTA AGCAAATTGA CGATTACACT
AAATTTGCCG GCATTTATGG TGCTAAAGGC TTAGCGTGGA TGAAAATAAA TGACTTAGCT
GCAGGCATGG ATGGTATTCA GTCGCCTGTA CTTAAGTTTT TAACAGAATC TATTGTTAAC
GACATTATTA GTCGTACGGG TGCACAAACC GGCGATATCA TTCTATTTGG CGCAGATAAA
GCCAATGTCG TGGCAGAAGC TTTGGGCGCA TTGCGCTTAA AAGCTGGTGA AGATTTCAAG
TTACTTGAAG GTGAGTGGCG CCCAATGTGG GTTGTCGACT TCCCGATGTT TGAGAAAATT
AACGGTGGAT TCCACGCTGT TCATCATCCA TTCACTGCGC CTCGCGGTAT TAGCCCAGCA
GAATTAGCAG CAGATCCAGC AGCAGCTATT TCAGATGCCT ACGACATGGT ATTAAATGGT
TGTGAATTAG GTGGCGGTTC AGTGCGTATT CATAACGCCG AAATGCAAAG TACTGTATTC
AGTATTTTAG GTATTGAAGC TGAAGAAGCA CAAGAAAAAT TTGGTTTCTT GCTTGAAGCG
TTACGCTACG GAACACCACC ACACGCTGGT TTAGCATTTG GTTTGGATCG TATTATTATG
TTGATGACCG GCGCAAGCTC AATTCGTGAC GTAATGGCAT TCCCTAAAAC GACTACCGCA
GCATGTCCAT TAACTAACGC TCCTGGTTTT GCAAACCCAG TGCAGTTAAC TGAATTGGGT
ATAGCGGTGA TTGAAAAGGT TAAAACTGAA GAATAA
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| Protein sequence | MRSHYCGDIN QSHLGQEVTL VGWVNRSRDL GGVVFLDLRD REGLVQVVYD PDLKDVFEMA
STLRSEFCVQ IKGVVRARPE SQINSQMKTG EIEILGKQLT IINASAPLPL SMDNYQNNSE
EQRLKYRYLD LRRPEMAERL IFRAKVTSSV RRFLDGNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MSAEQVMEKT EQMMRGLFQD LLNVDLGDFP RMTYAEAMKR YGSDKPDLRN PLELVDIADL
VKDVEFAVFN GPANDVEGRV AALRIPTGAS LSRKQIDDYT KFAGIYGAKG LAWMKINDLA
AGMDGIQSPV LKFLTESIVN DIISRTGAQT GDIILFGADK ANVVAEALGA LRLKAGEDFK
LLEGEWRPMW VVDFPMFEKI NGGFHAVHHP FTAPRGISPA ELAADPAAAI SDAYDMVLNG
CELGGGSVRI HNAEMQSTVF SILGIEAEEA QEKFGFLLEA LRYGTPPHAG LAFGLDRIIM
LMTGASSIRD VMAFPKTTTA ACPLTNAPGF ANPVQLTELG IAVIEKVKTE E
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