| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2179 |
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| Symbol | |
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| ID | 4279091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2606159 |
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| End bp | 2606569 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134974 |
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| Product | lactoylglutathione lyase |
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| Protein accession | YP_750863 |
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| Protein GI | 114563350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
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| TIGRFAM ID | [TIGR00068] lactoylglutathione lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.894872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCAAT TACTTCATAC GATGATCCGA GTAGGCAACC TAGAACGCAG CATTCAATTT
TATACCCAAG TGATGGGCAT GAAGCTACTG CGTCAATCTG AAAACTCAGA ATATAAATAC
ACCCTCGCCT TTGTTGGTTT TGGTGAAGAA ACCACAGGCC AGGCCGTTAT CGAATTAACC
TATAACTGGG GTGTCGATAG TTACGATTTA GGTAATGGTT TTGGACATTT AGCCATTGGC
GAAGACGATA TTTATGCGCG CTGTGAAGCC ATCGCTGCTG CTGGCGGTAA AATCACTCGA
GCCCCAGGCC CAGTAGCTGG CGGTAAAACC GAAATAGCCT TTGTAGAAGA CCCTGACGGA
TACAAAATCG AATTAATTCA AAAGAAATCG GCGACCGAAG CACTAGGTTA A
|
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| Protein sequence | MSQLLHTMIR VGNLERSIQF YTQVMGMKLL RQSENSEYKY TLAFVGFGEE TTGQAVIELT
YNWGVDSYDL GNGFGHLAIG EDDIYARCEA IAAAGGKITR APGPVAGGKT EIAFVEDPDG
YKIELIQKKS ATEALG
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