| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2177 |
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| Symbol | |
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| ID | 4279089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2604385 |
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| End bp | 2605080 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134972 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_750861 |
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| Protein GI | 114563348 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.206237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAAT ACAGTGAAAT TGCAGCTCAG GGGCTATGGA AAAATAACCC CGGTTTAGTG
CAACTATTAG GATTGTGTCC GCTACTAGCT GTTACTGCTA CCATCACCAA TGCATTAGGT
TTGGGCGTCG CTACATTGTT GGTATTAATT GGCTCCAATG TTTTGGTCTC TTTGGTTCGC
GATTTTGTAC CTAAAGAAAT TCGTATACCA GTATTTGTCA TGATCATTGC CGCACTTGTT
ACTTGCGTGC AATTACTGAT CAACGCTTAT GCCTATAATT TATATTTGTC ATTAGGTATT
TTCTTACCTT TGATTGTAAC CAACTGCGTC ATTATCGGCC GCGCAGAAGC ATTTGCCTCG
CGTAACTCAT TAGCGCATTC GGCATTCGAT GGATTAATGA TGGGCTTAGG CTTTACCGCT
GTACTGGTTG TTTTAGGTGC TAGCCGCGAA TTGCTCGGCC AAGGAACGTT ATTTGGCGGT
GCAGATTTAC TATTAGGTGA TTGGGCAAGT GTGTTAACCA TTCATGTATG GCATGTGGAC
ACGCCATTTT TATTGGCTAT GTTGCCGCCG GGAGCATTTA TTGGCATGGG ATTATTAATA
GCCCTTAAAA ATGTCATCGA TAGCCGAGTT AACGCCATGC AACCTAAAGT TGAAAGTGTT
AGCGTAACGC GTGCGCGGAT CACTAAAGTC AACTAA
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| Protein sequence | MSKYSEIAAQ GLWKNNPGLV QLLGLCPLLA VTATITNALG LGVATLLVLI GSNVLVSLVR
DFVPKEIRIP VFVMIIAALV TCVQLLINAY AYNLYLSLGI FLPLIVTNCV IIGRAEAFAS
RNSLAHSAFD GLMMGLGFTA VLVVLGASRE LLGQGTLFGG ADLLLGDWAS VLTIHVWHVD
TPFLLAMLPP GAFIGMGLLI ALKNVIDSRV NAMQPKVESV SVTRARITKV N
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