| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2173 |
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| Symbol | |
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| ID | 4279085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2599572 |
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| End bp | 2600153 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134968 |
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| Product | electron transport complex protein RnfB |
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| Protein accession | YP_750857 |
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| Protein GI | 114563344 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0287954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATATCGA GTATATTGAT TGCTGTTGCT GTATTAAGCG TTTTAGCATT AGTGTTTGGC
GTCATTTTGG GTTTTGCCTC AAAGAAATTC AAAGTTGAAG GAAATCCTAT TATTGATCAA
GTTGAAACCC TGTTACCGCA AACTCAATGC GGCCAGTGTG GTTACCCTGG TTGCCGCCCT
TATGCTGAGG CAATAGCGAA TGGCGATAAA ATCAATAAAT GCCCTCCAGG TGGTACTGCT
ACCATGGAAA AGATTGCTGA GCTTATGGGG GTTGAACCTG AAGCATTAGG CGAAGAGGCG
CAAGCCAGTG TAAAAAAAGT CGCTTACATC CGTGAAGATG AATGTATTGG TTGTACCAAA
TGTATTCAAG CCTGTCCGGT TGATGCTATT TTAGGCGCCG GTAAATTAAT GCACACCGTT
ATTGCCAAAG ATTGTACTGG CTGTGACTTA TGTGTTGAGC CTTGTCCTGT CGATTGTATT
GATATGATCC CAGTTGAAAC CACAATACAA AATTGGGATT GGAAGTTACG TGCTATCCCT
GTCAACGTGA TTAATCCTGA GCAAGAGGAC AAACGGTGCT AA
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| Protein sequence | MISSILIAVA VLSVLALVFG VILGFASKKF KVEGNPIIDQ VETLLPQTQC GQCGYPGCRP
YAEAIANGDK INKCPPGGTA TMEKIAELMG VEPEALGEEA QASVKKVAYI REDECIGCTK
CIQACPVDAI LGAGKLMHTV IAKDCTGCDL CVEPCPVDCI DMIPVETTIQ NWDWKLRAIP
VNVINPEQED KRC
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