| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2172 |
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| Symbol | |
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| ID | 4279084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2598910 |
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| End bp | 2599572 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134967 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_750856 |
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| Protein GI | 114563343 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
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| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00136515 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAACC TTATTTTTTA TCCGTTGTTT ATCGGCGCCA AACCTAAGAT AATACTGGGA
TCTATTGGTC AAAAAATTGT AGCAATGTCA GAGTATCTTC TCCTGTTGAT CGGCACAGTG
CTGGTGAATA ACTTCGTTCT GGTAAAATTC TTAGGTCTAT GCCCTTTTAT GGGGGTGTCG
AGCAAATTGG CGTCAGCAAT TGGCATGTCG ATGGCAACCA CGTTTGTGTT GACCCTAGCC
TCTATTCTGA GTTATCTCAC CAATGAATTT CTACTGCAAC CATTTGACCT CAACTACTTA
CGTACAATGA GTTTTATTTT GGTTATTGCA GTTGTAGTGC AATTTACTGA GATGGTTGTC
CAAAAAACCA GTGCATCTTT ACATCGTGCT TTGGGCATTT ACTTGCCGCT GATCACGACT
AACTGCGCGG TATTAGGTGT AGCTTTACTT AACGTCAATG AAGACCATAA CTTTATTCAA
TCTGCTATTT ATGGTTTTGG TGCGGCGGTT GGATTCTCCT TAGTATTAAT TTTATTTTCG
GCCATGCGTG AGCGATTAGC CGCTGCAGAT GTGCCCTTAC CTTTTAAAGG TGGCGCTATT
GCCATGATCA CTGCCGGTTT AATGTCATTA GCCTTTATGG GATTTGCGGG GCTAGTGAAC
TAA
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| Protein sequence | MFNLIFYPLF IGAKPKIILG SIGQKIVAMS EYLLLLIGTV LVNNFVLVKF LGLCPFMGVS
SKLASAIGMS MATTFVLTLA SILSYLTNEF LLQPFDLNYL RTMSFILVIA VVVQFTEMVV
QKTSASLHRA LGIYLPLITT NCAVLGVALL NVNEDHNFIQ SAIYGFGAAV GFSLVLILFS
AMRERLAAAD VPLPFKGGAI AMITAGLMSL AFMGFAGLVN
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