| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2166 |
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| Symbol | |
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| ID | 4279078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2586519 |
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| End bp | 2588804 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134956 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_750850 |
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| Protein GI | 114563337 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACTAG AGAAGTTGCT ATATTTGCAA GGCGTTGGGG CAGAGTTTAT CGATTGTTTC
GGTAATCTTG TTCACATACC CGCTAGGGAC AGGCAGGGCA TTTTAACCAC GATGTTATTG
CAATCATCGT TTCATCAACA TGAACATCTT CATGATGAGT CCGACCCGCA ATCATTTGAT
GTACAGGATT TTACTCAGCA GCAATTATCA CAACCAAGGA TAGACGCACG AATAGAGCTA
CTCGATGTAC AGCCTTGGTT GCTTCCGCTA CATACTTTTC AATGGTGTAC TATTGATAAG
CCTCATGTTG ATGTCTATCT GCCAGAGAAT TATGTATCTG GGTTTGTGGT GACCATCAGC
GGTGAAAATA TTGACACAAT CTCGGTGAGT GCCAATGTAT GTGATTGTGT TATTGCTGGC
GAATATCATA TTAATGATAA GCGTTATTGC CAATATCGCT TAATGCTTGA TAACGCTACA
TTGAATTTAG GTTATCACCA AGTTGATTTA GCGTTTAATC ATGATCCTCA GCGTAAAGAC
ACCTTACATG GACAGTTGAT GGTTGCACCG TCTTCGGCTT ATCAAGGTCG TTCAGCGCAA
CCATTTAACA ACAATAAGGA ATCATGGGGA CTTAATGCGC AACTGTATGC TTTACGTAAT
GAGGCGCAAT GGGGCATTGG TGATTTTGGC AATTTAGCTG AACTTATAGA GTATGCTGCC
AATGCCGGTG CGGATTTTAT CCTTCTCAAT CCACTACATG CTGTAGACAT CAGCCAGCCA
GATAACCCTA GTCCATACAG TCCAACGGAC CGCCGTCGAT TAAACCCTTT ATATATACAA
ATTGAAGCCG TTGATGAATA TAAGGCCCTC AATGGGGAAC TATTATCACA GAAGTGGCAA
CAAAAAAGGT TAGTGCTGAA TCAAGCACAT CTTATAAATT ACGATGAAGT GCATAGCCTG
AAATACGCAG CCTTAGAGAA AATGTATCAA ATATTTTGTT CTCACCACGT CAAGCTCGAA
ACGCCACGGT ACAAAGCCTA TAAGGCGTTT TTAGCACATG ATGAAGCTGC ACTGATGCAG
TTTGTTACCG TTGAAGTGGA ATTGGCATCT AAATATTTCA CTCAAGATGT TGGCTTTTAT
TTGTATCTAC AATTTGTCGC TAATGAGCAA TTACAAGCTT GCCAGTTGAA TGCAAAACAA
TGTGGTATGA GTATTGGGCT TATTCGTGAT TTGGCTGTCG GGGCTGTGAG TCATGGCGCC
GAAATTAGTG CCAATGCCGA TTTGTTTTGT GACAACGCCA GTATTGGTGC ACCGCCAGAT
CCTTTTGCTG AACATGGCCA AAATTGGGGT TTAACCCCAT TCGATCCGGT TAAATTAAAA
CAGCATGATT ATAGTCATTT TATCCAGTTG GTTCGCAGTA ATATGCAAAG TTGCGGGGCA
TTGAGAATTG ATCATGTCAT GGGATTATTG CGTTTGTGGT GGTGGCCACT ACATGAAGAA
CTCGGTAATG GTTGTTATGT CTATTATCCG TTAGAAACCT TGTTAGCCAT TGTTTGTTTA
GAAAGTCAGC GCGCTCGTTG TATCGTGATT GGCGAAGATT TAGGCATAGT ACCACCGGAA
ATTGTGGCGT GTTTGAAGGA AGCCGGCATT TTATCCAATG AATTATTTTA TTTTTGTAAA
GACCACAATC GCTTCAAATC ACCACAAAAC TATAAGCGTC AAAGCCTGAT GATGCTGGCT
AATCATGATG TACCAACGCT TTCTGCGTGG TGGTTTGGTG CTGACTTACG TCTACGACGT
CAGCTCGAAT TGATTGAAAC CGATGACAAA TTACAACAGG CCATAGACCA GCGTCAGCAA
GAGAAACTGC AATTGATTGA CTTGCTTATC CGCGAACAGG AATTTGAACT ACCAACCTCC
ATTACATCGG TTGAACAATT AGATTTTGAC AGTGTGTTAT TGGCCTGGAT ACGTGTTGCC
GCAAATGGCA ATGCACAACT GTTTAGTGTG CAATTAAGTG ATTTAGTCGC CGATAAACAC
GGGGTAAATA TTCCCGGCAC CTGGAAAGCA TTCCCTAATT GGCAGCGTCG ATTACCCCTT
TCAATCAAAC AAATGTCCCA AAGCCCTAAA GTGCAGCAAC GTCTAGAAGC GATAGCATCA
GCCCGAAAGT CCCGAACTCA AGCCAGTGCA GTTAACACAA GTGCAGTTAA CACAAGTGCA
GTAAATACAA GAACAGTAAA CACAAATACA GAAAACACAT CGTCATCCGA TAAACTTACC
TATTAA
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| Protein sequence | MGLEKLLYLQ GVGAEFIDCF GNLVHIPARD RQGILTTMLL QSSFHQHEHL HDESDPQSFD
VQDFTQQQLS QPRIDARIEL LDVQPWLLPL HTFQWCTIDK PHVDVYLPEN YVSGFVVTIS
GENIDTISVS ANVCDCVIAG EYHINDKRYC QYRLMLDNAT LNLGYHQVDL AFNHDPQRKD
TLHGQLMVAP SSAYQGRSAQ PFNNNKESWG LNAQLYALRN EAQWGIGDFG NLAELIEYAA
NAGADFILLN PLHAVDISQP DNPSPYSPTD RRRLNPLYIQ IEAVDEYKAL NGELLSQKWQ
QKRLVLNQAH LINYDEVHSL KYAALEKMYQ IFCSHHVKLE TPRYKAYKAF LAHDEAALMQ
FVTVEVELAS KYFTQDVGFY LYLQFVANEQ LQACQLNAKQ CGMSIGLIRD LAVGAVSHGA
EISANADLFC DNASIGAPPD PFAEHGQNWG LTPFDPVKLK QHDYSHFIQL VRSNMQSCGA
LRIDHVMGLL RLWWWPLHEE LGNGCYVYYP LETLLAIVCL ESQRARCIVI GEDLGIVPPE
IVACLKEAGI LSNELFYFCK DHNRFKSPQN YKRQSLMMLA NHDVPTLSAW WFGADLRLRR
QLELIETDDK LQQAIDQRQQ EKLQLIDLLI REQEFELPTS ITSVEQLDFD SVLLAWIRVA
ANGNAQLFSV QLSDLVADKH GVNIPGTWKA FPNWQRRLPL SIKQMSQSPK VQQRLEAIAS
ARKSRTQASA VNTSAVNTSA VNTRTVNTNT ENTSSSDKLT Y
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