| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2164 |
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| Symbol | |
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| ID | 4279076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2582129 |
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| End bp | 2584255 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134954 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_750848 |
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| Protein GI | 114563335 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTCAA CTTTACAAGG GCATGTTATG GATATGACCA GCGGTTATCC TTATCCACTA
GGGGCAACAC TCGATGATAA CGGGGTGAAT TTTTCGTTAT TTTCGGCGCA TGCAACAAAA
GTAGTGCTGT GTATTTTTGA CTCCACAGGC TGTGTTGAAA TAGCGCAATA CATTATGCAG
CATCAAACAC GACAAATTTG GCATTGCCAC TTATCGGGTG CTAAAGCGGG ACTGCTTTAT
GGCTATCGAG TTTTTGGGCC TTACCAGCCT GAACTCGGGC ACCGTTTTAA TCATCATAAA
TTTCTGCTCG ATCCTTACGC CAAAAGATTA GTCGGGGAAG TGACATACCA CTCTGCGATT
TATGGTTATG ACATTGATGC CTTAAATGAA GATTTGTCAT TTGATACTCA AGACAGCGCA
CCATACATGC CCAAATGTAT GGTGTCAGAC AGTCGATTTG TAAACGATAT TCCAATTGCA
CCCCTTAATA TTAGTCTCGC TAGAAGCATC ATATTCGAGA CTCATGTAAA GGGTTTTACT
CAACAGCACC CCAATATTCA ATTGTCCCAA CAAGGGACGT TTGCTGGGTT AGCTAGCCAA
CCGATAATTG ACTATTTACA AAACTTAGGG ATTACCTGCA TAGAGTTGTT ACCCGTGCAT
GGCTTTTTTG ATGAACCCTT TTTGGTGCAA AAAGGCCTGA CTAATTACTG GGGTTACAAC
AGTATTGCTT TTATGGCTCC ACATTCTGCT TATTTATCGG ATGAGGGAGA TATTGGCGAA
TTCAGACGAA TGGTTTCTAC ACTTCATCTT GCTGGGATTG AAGTGATCCT CGATGTGGTT
TTTAACCATA CCGCCGAAGG AAACCATTTG GGACCCACTT TCAGTTTTCG TGGTATCGAT
AATGCTAGCT ACTATCGGTT ATTACCCAAT GAAAAACGTT TCAACATTAA CGATACTGGC
TGCGGTAATA CCTTCAACCT TAATCATCCC CAAGTACTGA TGCTGGTCAT GGATTCGCTG
CGCTACTGGG TAGAAGTGAT GGGAGTGGAT GGGTTTAGAT TTGATTTAGC CAGTTGCCTT
GGACGAGAAG CTTATGGTTT TGATCGTGGA AGTGGCTTTT TTGATGCCAT CACTCAAGAT
CCTGTGTTGT GCAAAGTCAA ATTGATTGCT GAGCCGTGGG ACATCGGCCC GGGGGGGTAT
CAGTTAGGCA ATTACCCAGT GGCATTCAGT GAGTGGAATG ACCGTTATAG AGATGCTATG
CGCAAATTCT GGCGTGGCGA CAGTGGTTTA TCACCTGAGT TTGCCAAGCG GTTCCACGGT
TCAAGCGATT TTTTCGAACA TAACGGTCGT GGCCCTGCCG CCAGCATCAA TTTTATTACT
AGCCATGATG GTTTTAGTTT GCATGATTTG GTCAGTTACC GTGATCGTCA TAACTTGGCC
AACGGTGAAG AAAATCGCGA TGGTCATCAA GAAAACTGTA GCAGCAATTA CGGCATAGAA
GGTGAGTGCG ACGATGTCGA TATTAATGCA ATCCGCAGCC GACAAAAACG TAACTTATTA
ACGTGTTTGT TGCTGTCTCA GGGGGTGCCA ATGTTGTTGG CCGGCGATGA ATCTAGCCAA
ACTCAGCAAG GTAATAACAA TGCCTATTGC CAAGACAATC CTATTGGTTG GTTCAACTGG
CAGCAAATAG ATTGGTCATT GGTGAATTTT ACCGCTCAGT TGATCACCTT ACGTAAACGC
TTTCCTATGT TATGCCATCA AGCATTTATT CATAAACCTG AAGCACTATT CGATAATGGT
CTAGCATGGT TTAACCGCCA GGGTGAGGTG ATGAACAAAT GCCATTGGGG TGAGTATCAA
ATCCGGACTT TGAGTGTCAT CTTAACGGGA AATTTAGCTC ATGCTGATGT TGGCGCTGTC
GCTGAGAGTA CAGAAGCATT GTTATTGATG ATTAATACAG ACGAGTTAGC GCATACCTTT
ACTCTGCCCC AATTACCCCA TCTTCGATAT TGGCATTGTT TATTACATAC CCAAGAAAGT
GAGCCTTCAG TGGATGAGGA TCAGCAAGTC AGTTTAATGA GTCGTAGTTT AATGTTATTC
CATACCGAGT TTACAAGGAG CAATTGA
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| Protein sequence | MVSTLQGHVM DMTSGYPYPL GATLDDNGVN FSLFSAHATK VVLCIFDSTG CVEIAQYIMQ
HQTRQIWHCH LSGAKAGLLY GYRVFGPYQP ELGHRFNHHK FLLDPYAKRL VGEVTYHSAI
YGYDIDALNE DLSFDTQDSA PYMPKCMVSD SRFVNDIPIA PLNISLARSI IFETHVKGFT
QQHPNIQLSQ QGTFAGLASQ PIIDYLQNLG ITCIELLPVH GFFDEPFLVQ KGLTNYWGYN
SIAFMAPHSA YLSDEGDIGE FRRMVSTLHL AGIEVILDVV FNHTAEGNHL GPTFSFRGID
NASYYRLLPN EKRFNINDTG CGNTFNLNHP QVLMLVMDSL RYWVEVMGVD GFRFDLASCL
GREAYGFDRG SGFFDAITQD PVLCKVKLIA EPWDIGPGGY QLGNYPVAFS EWNDRYRDAM
RKFWRGDSGL SPEFAKRFHG SSDFFEHNGR GPAASINFIT SHDGFSLHDL VSYRDRHNLA
NGEENRDGHQ ENCSSNYGIE GECDDVDINA IRSRQKRNLL TCLLLSQGVP MLLAGDESSQ
TQQGNNNAYC QDNPIGWFNW QQIDWSLVNF TAQLITLRKR FPMLCHQAFI HKPEALFDNG
LAWFNRQGEV MNKCHWGEYQ IRTLSVILTG NLAHADVGAV AESTEALLLM INTDELAHTF
TLPQLPHLRY WHCLLHTQES EPSVDEDQQV SLMSRSLMLF HTEFTRSN
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