Gene Sfri_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2135 
Symbol 
ID4279047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2542700 
End bp2543101 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content41% 
IMG OID638134924 
Productferredoxin 
Protein accessionYP_750819 
Protein GI114563306 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCTATA AAAAACTTTT CAAAAAAGCC CCAATCGTAA GCTTGAAAGG ACAGCCGGTT 
ATTTTATTTG ACGGCCAACA TTCAAGCTTA TTAGAAGCGC TTGAGTCGAA AAAAGTGAAA
GTGTTTTCAG AGTGTCGTAA TGGATTTTGC GGCGCGTGTA AAACCACAGT GATATCAGGA
GAAGTTAAAT ACTTCTCCGA GCCACTAGCT GAACTTAAAT CAGATGAATG TCTGCCCTGT
TGTTGTGTGC CTGAGGGTGA TTTAAATCTC AAACTATCAA CTGAAGGTGT GCAAGTGGTG
GCTAAACGTC AATATGCCTC AACCAATGAC ACTCATAAGC CAACAACTGC GTTAACCCAA
CAATTACAGA CTAACAGCCC TAAACTTGCC CACGAACGTT AA
 
Protein sequence
MTYKKLFKKA PIVSLKGQPV ILFDGQHSSL LEALESKKVK VFSECRNGFC GACKTTVISG 
EVKYFSEPLA ELKSDECLPC CCVPEGDLNL KLSTEGVQVV AKRQYASTND THKPTTALTQ
QLQTNSPKLA HER