| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2132 |
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| Symbol | |
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| ID | 4279044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2537965 |
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| End bp | 2538627 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134921 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_750816 |
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| Protein GI | 114563303 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATAAAC AAGATATAAA AGGAGTGCTG TTCGATTTAG ACGGTACCTT AGCCGATACA
GCCCCAGATT TAGTGCAGGC ATTGAACCTC AGCTTGGATG AAGCCGGTTT TAACGTCCAA
CCGCTTGATT TGATGCGCCA TGCAGCATCA CATGGCAGCT TATATTTAGT CAAAACGGCC
ATTCCAGATG CCGATGAACA AGTACAAATC ACCATCCAGC AAGCGCTACT TCAGCATTAT
GCCCGTATTA ATGGTGACAA CAGCCGTTTA TTTGATGACT TACCTGAACT GTTGTCTTTA
TTTGATGCCC AATCGATTCC TTATGGTGTC GTGACCAATA AGCCAGCTCG ATTTGCCAGG
CCATTAGTGG AAAAGCTTGG TTTAACTCAT AAATTGAAAA CCATGATCAG TGGTGATAGC
ACCCGCCACT CTAAACCTCA TACCGCACCA ATGCTGTTAG CAGCACAACA AATTGCCATT
GCTCCTCAAA GTATCTTATA TCTAGGCGAT GCCGAACGCG ACTTAGTCGC CGCCCATAAT
GCCAGTATGT TAGGTGGCGT TGCTTTATGG GGTTATTTAT CTGCGACAGA TAAACCTGAC
ACATGGCCTG CAGGCAGACA ATTTGAACAT GGCGCCTCAC TAAAGCAATT CTTCACTGAT
TAA
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| Protein sequence | MHKQDIKGVL FDLDGTLADT APDLVQALNL SLDEAGFNVQ PLDLMRHAAS HGSLYLVKTA
IPDADEQVQI TIQQALLQHY ARINGDNSRL FDDLPELLSL FDAQSIPYGV VTNKPARFAR
PLVEKLGLTH KLKTMISGDS TRHSKPHTAP MLLAAQQIAI APQSILYLGD AERDLVAAHN
ASMLGGVALW GYLSATDKPD TWPAGRQFEH GASLKQFFTD
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