Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2127 |
Symbol | |
ID | 4279039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2529919 |
End bp | 2531280 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134916 |
Product | serine transporter, putative |
Protein accession | YP_750811 |
Protein GI | 114563298 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATG AAGCCATAAG TGTACAAGAG GTCCCCGAGT CAATCGTTGT TTCAGCTACT GGCTGGACAC GTCAGGATAC CACCTGGATG TTGAGCTTGT TTGGCACCGC AGTTGGCGCT GGAATTTTAT TTTTACCGAT CAATGCCGGA ATGGGAGGTT TTTGGCCATT AGTGTTAATG GCACTCATGA TAGGCCCAAT GACCTATCTC GCTCACCGTG GATTATCTCG CTTCCTATGC TCATCTGCTA TTCCTGGCAG TGACATCACT CAGGTAGTTG AAGAACATTT TGGTGCTGGA GCCGGTAAAG CGATTACTTG GCTGTATTTT TTAGCCATAT ATCCCATTGT ATTAATCTAT GGCGTTGGGA TAACCAATAC CGTCGACAGT TTCATTATTA ATCAATTAGG CATGTTTACC GACGTCCCAA GAATGTTACT CGACGGTACG CCTGCACTGA CAGAAGCTGG CGGGCAAATC ATCGATAAAG TCAGTGGTAT TCAACGTTGG CTACTTTCGG GTATGTTAAT TTTAGGCATG ATGTCGGTGA TGGTTGCGGG TGAAAAATTT ATGCTCTCCG TGACGCGGTT ATTAGTCTAT CCGCTCGTCG CAATCCTTGC TTTTATGTCC TTGTACCTTA TACCAGACTG GAAGTTTGAT GCGCTAATGG TTGTGCCTTC AACAACCAAT TTTCTTGGTA CTGTTTGGTT AACCATTCCA GTGTTGGTAT TTGCCTTTAA CCATTCACCC GCTATCTCAC AATTCTCGGT TTCTCTCAAA AAAGAACATG GCGCTAATGC TTCCCATAAA GCCGATGTCA TCCTCCGCAA TACAGCCATT ATGTTAGTCG GATTTGTGAT GTTGTTTGTG TTCTCCTGTG TTCTGTCACT AACACCGGCG CAGTTATTAG AAGCTAAAGC CGATAACTTA CCGATATTGT CTTATCTAGC CAACGTGCAT GAAAGTGGCT TTATCAGCTA CTTTGCCCCT GTCATTGCTT TCATCGCCAT TATTTCATCT TTCTTCGGTC ACTACATGGG GGCAACAGAA GGTTTGAAAG GCATCATTAT CAAGCAATTA CCCGACAGCA GTAAGCCAGA AAATAGCAAA AAACTGGATA AATTTATCTT AGGATTTATG TTTATGACTA CTTGGGGCGT GGCGGTTATG AACCCAAGTA TTCTGGGTAT GATTGAGGCG CTTGGTGGCC CGGTGATTGC GGCTATTTTA TATCTCATGC CAATGTATGC GATATACAAA GTACCGGCAC TGAAAGCCTA CCGCGGTCGA GTCAGTAACA TATTCGTCGT CATTACTGGT TTATTATCTA TGACAGCCAT TCTATTCGGC TTACTGAGTT AA
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Protein sequence | MQNEAISVQE VPESIVVSAT GWTRQDTTWM LSLFGTAVGA GILFLPINAG MGGFWPLVLM ALMIGPMTYL AHRGLSRFLC SSAIPGSDIT QVVEEHFGAG AGKAITWLYF LAIYPIVLIY GVGITNTVDS FIINQLGMFT DVPRMLLDGT PALTEAGGQI IDKVSGIQRW LLSGMLILGM MSVMVAGEKF MLSVTRLLVY PLVAILAFMS LYLIPDWKFD ALMVVPSTTN FLGTVWLTIP VLVFAFNHSP AISQFSVSLK KEHGANASHK ADVILRNTAI MLVGFVMLFV FSCVLSLTPA QLLEAKADNL PILSYLANVH ESGFISYFAP VIAFIAIISS FFGHYMGATE GLKGIIIKQL PDSSKPENSK KLDKFILGFM FMTTWGVAVM NPSILGMIEA LGGPVIAAIL YLMPMYAIYK VPALKAYRGR VSNIFVVITG LLSMTAILFG LLS
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