| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2127 |
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| Symbol | |
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| ID | 4279039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2529919 |
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| End bp | 2531280 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134916 |
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| Product | serine transporter, putative |
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| Protein accession | YP_750811 |
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| Protein GI | 114563298 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATG AAGCCATAAG TGTACAAGAG GTCCCCGAGT CAATCGTTGT TTCAGCTACT
GGCTGGACAC GTCAGGATAC CACCTGGATG TTGAGCTTGT TTGGCACCGC AGTTGGCGCT
GGAATTTTAT TTTTACCGAT CAATGCCGGA ATGGGAGGTT TTTGGCCATT AGTGTTAATG
GCACTCATGA TAGGCCCAAT GACCTATCTC GCTCACCGTG GATTATCTCG CTTCCTATGC
TCATCTGCTA TTCCTGGCAG TGACATCACT CAGGTAGTTG AAGAACATTT TGGTGCTGGA
GCCGGTAAAG CGATTACTTG GCTGTATTTT TTAGCCATAT ATCCCATTGT ATTAATCTAT
GGCGTTGGGA TAACCAATAC CGTCGACAGT TTCATTATTA ATCAATTAGG CATGTTTACC
GACGTCCCAA GAATGTTACT CGACGGTACG CCTGCACTGA CAGAAGCTGG CGGGCAAATC
ATCGATAAAG TCAGTGGTAT TCAACGTTGG CTACTTTCGG GTATGTTAAT TTTAGGCATG
ATGTCGGTGA TGGTTGCGGG TGAAAAATTT ATGCTCTCCG TGACGCGGTT ATTAGTCTAT
CCGCTCGTCG CAATCCTTGC TTTTATGTCC TTGTACCTTA TACCAGACTG GAAGTTTGAT
GCGCTAATGG TTGTGCCTTC AACAACCAAT TTTCTTGGTA CTGTTTGGTT AACCATTCCA
GTGTTGGTAT TTGCCTTTAA CCATTCACCC GCTATCTCAC AATTCTCGGT TTCTCTCAAA
AAAGAACATG GCGCTAATGC TTCCCATAAA GCCGATGTCA TCCTCCGCAA TACAGCCATT
ATGTTAGTCG GATTTGTGAT GTTGTTTGTG TTCTCCTGTG TTCTGTCACT AACACCGGCG
CAGTTATTAG AAGCTAAAGC CGATAACTTA CCGATATTGT CTTATCTAGC CAACGTGCAT
GAAAGTGGCT TTATCAGCTA CTTTGCCCCT GTCATTGCTT TCATCGCCAT TATTTCATCT
TTCTTCGGTC ACTACATGGG GGCAACAGAA GGTTTGAAAG GCATCATTAT CAAGCAATTA
CCCGACAGCA GTAAGCCAGA AAATAGCAAA AAACTGGATA AATTTATCTT AGGATTTATG
TTTATGACTA CTTGGGGCGT GGCGGTTATG AACCCAAGTA TTCTGGGTAT GATTGAGGCG
CTTGGTGGCC CGGTGATTGC GGCTATTTTA TATCTCATGC CAATGTATGC GATATACAAA
GTACCGGCAC TGAAAGCCTA CCGCGGTCGA GTCAGTAACA TATTCGTCGT CATTACTGGT
TTATTATCTA TGACAGCCAT TCTATTCGGC TTACTGAGTT AA
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| Protein sequence | MQNEAISVQE VPESIVVSAT GWTRQDTTWM LSLFGTAVGA GILFLPINAG MGGFWPLVLM
ALMIGPMTYL AHRGLSRFLC SSAIPGSDIT QVVEEHFGAG AGKAITWLYF LAIYPIVLIY
GVGITNTVDS FIINQLGMFT DVPRMLLDGT PALTEAGGQI IDKVSGIQRW LLSGMLILGM
MSVMVAGEKF MLSVTRLLVY PLVAILAFMS LYLIPDWKFD ALMVVPSTTN FLGTVWLTIP
VLVFAFNHSP AISQFSVSLK KEHGANASHK ADVILRNTAI MLVGFVMLFV FSCVLSLTPA
QLLEAKADNL PILSYLANVH ESGFISYFAP VIAFIAIISS FFGHYMGATE GLKGIIIKQL
PDSSKPENSK KLDKFILGFM FMTTWGVAVM NPSILGMIEA LGGPVIAAIL YLMPMYAIYK
VPALKAYRGR VSNIFVVITG LLSMTAILFG LLS
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