| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2115 |
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| Symbol | |
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| ID | 4279027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2516490 |
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| End bp | 2518247 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134904 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_750799 |
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| Protein GI | 114563286 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000107546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAT ACCAAGCCCC GTTGAAGGAC ATGCAATTCT TGTTGGAACA GGTATTTGAT
GCCCAAGCTA CGTGGGAACA ACTTCCTGCT ATGGCAGATG TTGTCGACAT GGATACCGCA
TTAGCCATTC TAGATGAAGC GAATAAGATC AGCCGTGATC TGCTTCACCC TTTAAATCGC
AGTGGTGATG AGCAAGGTGT GGTTCATAAA GGTAATGACA TTATTACTCC AGATGGCTTT
AAAGAAGTGT ATCAACAGTT TTCTGAAGGT GGCTGGGTAG GGCTTTGCGG CGAGTCAGAT
TTTGGTGGCA TGGGGATGCC GAAAATGCTT GGCGTGTTAG TCGATGAAAT GAATTACAGC
TCGTGTAACT CGTTTACGTT ATACAACTCC CTGACCGCTG GTGCAGCGTT ATGTATTAAT
GCACATGCCA ATGACGAATT AAAACAAACT TATTTACCTA ATTTATATTC TGGCCAATGG
GCCGGAGCAA TGGACATGAC CGAGCCACAC GCAGGTTCTG ACTTAAAAGG TATTCGTACT
AAAGCTGAAC CACTTGATGA TGGCAGTTAT TCTATTACCG GTAACAAGAT TTTTATTACT
GGCGGCGATC ATGATTTAAC TGAAAACGTG ATTCATTTAG TATTAGCAAA ACTGCCCGGT
TCGAAAGGCA TATCATTGTT TATCGTACCT AAAATCAGCG TCAATGCCGA TGGTAGCTTA
GGCGAATCTA ATGGTGTTAC GGTGGGTTCT ATTGAACACA AAATGGGTCT TAAAGCGTCT
GCTACCTGTG TGATGAACTA CGATAATGCC AAAGGCTTTT TAGTTGGTGA GCCTGATCGC
GGTTTAGTGT GTATGTTCAC TATGATGAAC TACGAACGTT TAGCCATTGG TTTACAAGGT
TTAGGTAACG CACAAGCGGC TTATCAAATG GCCAGTGATT ATGCTAAAGA ACGCCTACAA
GGTGTTGCTG CAGCAGGTTC TGCAACGGGT GCAACGTCTG ATCCGATTAT TGTGCATGGC
GATGTACGTC GCATGTTACT CACTATCCGT GCGATGACAG AAGCAGGCCG TGCATTATCG
GTTTATACCG GTAAGCAGTT GGATTTAGCA AAGTATGCCA GCGGCGATGT GCAAGCTAAA
GCGGCTAGGT ACGTTGGTTT ACTTACACCT GTTTCAAAAG CATTTTTAAC CGATCGCGGT
TTAGATGCTA CAGTTATGGG CCAACAAGTA TTTGGCGGTC ATGGTTATAT TCGTGAAACC
GGAATCGAGC AGTTTGTTCG TGATACCCGT ATTGCACAAA TATACGAAGG CACTAACGGT
ATTCAAGCAA TCGACTTTTT AGGCCGTAAA ATTACTTACG ACAATGTGGT CACTTTGACC
GAATTTGTTG CTGAAGTGAA TGCAAGTCTT GCACAATTAA CTCAAGCTAA TGCTGAACAT
AAAGCCATGG TAAGCCAAGT GTTTGCTGAG TTGCTCACGA CAGCTAACTA CGTCAATGAC
AACAAGAAAA CTCAACCAGC ATTAGTCAAT TCTTGTGCGG TCGACTTCTT AGATGCCTTT
GGTTATGCCC TATACGGTTA CTTCTGGTTA TTGATGGCCG ACAAAGCGTC AAGCCATGAA
GATAAAACCT TTGCTGCCCA AAAGCAGTTT GTGGCTGACT TCTATATGGA TAAGCTGTTA
TCAAAATCTC AGTATCATTT ATCACAAGTT AATCAAGGTG ATAAATCGAT AATGGCAATG
CCTGCAGAAA TGTTCTAA
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| Protein sequence | MNPYQAPLKD MQFLLEQVFD AQATWEQLPA MADVVDMDTA LAILDEANKI SRDLLHPLNR
SGDEQGVVHK GNDIITPDGF KEVYQQFSEG GWVGLCGESD FGGMGMPKML GVLVDEMNYS
SCNSFTLYNS LTAGAALCIN AHANDELKQT YLPNLYSGQW AGAMDMTEPH AGSDLKGIRT
KAEPLDDGSY SITGNKIFIT GGDHDLTENV IHLVLAKLPG SKGISLFIVP KISVNADGSL
GESNGVTVGS IEHKMGLKAS ATCVMNYDNA KGFLVGEPDR GLVCMFTMMN YERLAIGLQG
LGNAQAAYQM ASDYAKERLQ GVAAAGSATG ATSDPIIVHG DVRRMLLTIR AMTEAGRALS
VYTGKQLDLA KYASGDVQAK AARYVGLLTP VSKAFLTDRG LDATVMGQQV FGGHGYIRET
GIEQFVRDTR IAQIYEGTNG IQAIDFLGRK ITYDNVVTLT EFVAEVNASL AQLTQANAEH
KAMVSQVFAE LLTTANYVND NKKTQPALVN SCAVDFLDAF GYALYGYFWL LMADKASSHE
DKTFAAQKQF VADFYMDKLL SKSQYHLSQV NQGDKSIMAM PAEMF
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