| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2112 |
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| Symbol | |
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| ID | 4279024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2514711 |
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| End bp | 2515718 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134901 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_750796 |
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| Protein GI | 114563283 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0674973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCTA AAAAGACGAT TCAACTTAGC CACGGTGGTG GCGGTAAAGA AATGGATCAA
TTGATCCACG ATTTGTTTTT TAAAGCCTTT GATAATCCTA TTTTAACTTC GCAAGAAGAC
GCGGCCAAAC TGAATATGTG TGGCCATATT GCTTTTACCA CCGACTCTTT TACCGTTTCA
CCGTTATTTT TCGCTGGTGG CGATATCGGT AAACTCGCGA TTGCAGGCAC AGTAAACGAT
TTAGCCATGA TGGCTGCACA ACCCGAATAT TTAAGCTGTA GTTTTATTAT TGAAGAAGGT
TTTCCACTGG ATGACTTAAC CACTATTGTA AATAGCATGG CAGCTGAATT ACACAAATCA
GGCGCGCGGA TAGTTTGCGG CGACACTAAA GTGGTGCCCA AAGGCTGTGC TGATGGGCTA
TTTATTAATA CCTCTGGTGT AGGGCGTATT TTGCATCCTG ATATTTCAGT GCGTAATTTA
CAAGTAGGTG ATGCCATTAT TGTCTCTCGT GACATTGGTT GTCATGGGGC GGCAATTTTA
ATGGCCCGTG ATGGCTTAAC GCTGGAATCT GAGTTACGCA GTGACTGCGA TACGCTATGG
CCGATTATTG AACAACTGCT GGTGGCAAAT ATCGATATTC ATGCCATGCG AGATGCGACC
CGCGGTGGCT TATCTGCAGT ACTCAATGAG TGGGCGAAAG CATCGAACAT TGGCATTGAT
GTCGAAGAAG CCAGCATTCC AATTTGTGAT GAAGTAAAAG GCTTATGTGA GTTATTTGGC
TTTGAGCCTT TTGATTTAGC CAATGAAGGC ACCTTTATTA TGGCATTGCC TATGGATTTA
GCCGAAGGTG CAATTGAGGT GATGCAGCGC TATGGACATT GTGAACACGC AGCAATTATT
GGCCACGTTA CTGAGCGTCA CCCTGGCAAA GTGGTGCTAC AAACGCCTTG GGGCAGCAGT
CGCTATTTAG ATTTACCACA AGGTGAATTA TTACCAAGGA TTTGTTAA
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| Protein sequence | MTSKKTIQLS HGGGGKEMDQ LIHDLFFKAF DNPILTSQED AAKLNMCGHI AFTTDSFTVS
PLFFAGGDIG KLAIAGTVND LAMMAAQPEY LSCSFIIEEG FPLDDLTTIV NSMAAELHKS
GARIVCGDTK VVPKGCADGL FINTSGVGRI LHPDISVRNL QVGDAIIVSR DIGCHGAAIL
MARDGLTLES ELRSDCDTLW PIIEQLLVAN IDIHAMRDAT RGGLSAVLNE WAKASNIGID
VEEASIPICD EVKGLCELFG FEPFDLANEG TFIMALPMDL AEGAIEVMQR YGHCEHAAII
GHVTERHPGK VVLQTPWGSS RYLDLPQGEL LPRIC
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