Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2110 |
Symbol | |
ID | 4279022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2513355 |
End bp | 2513597 |
Gene Length | 243 bp |
Protein Length | 80 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638134899 |
Product | hydrogenase assembly chaperone hypC/hupF |
Protein accession | YP_750794 |
Protein GI | 114563281 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0298] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.305152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCTTAT CAGTACCATC AAAAGTAGTT GAAATTCATG ATGATGCAAC AGTCACTGTT GACACGCTTG GTGTGAAACG TCGGGTAAGT TGTCATTTAA TATGCGACCC GTTGGCGTTA GGCGACTTTG TGTTGATTCA CATTGGCTTT GTGATGAATA AAATTGACCA CAATGATGCA CAAGAAAGCC TCGATTTATA TCAACAAATT GTCGCTGAGA TGGAATTGGA GTCTGAGCAA TGA
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Protein sequence | MCLSVPSKVV EIHDDATVTV DTLGVKRRVS CHLICDPLAL GDFVLIHIGF VMNKIDHNDA QESLDLYQQI VAEMELESEQ
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