Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2105 |
Symbol | |
ID | 4279017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2506641 |
End bp | 2507309 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638134894 |
Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
Protein accession | YP_750789 |
Protein GI | 114563276 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACATA TTGCAACCCA TAATCGGCAG CTGATATTTA CTCCAGCGAT TCGAATATTT CACTGGTTAC GCGCTCTGGC CATTTTGGTA TTAGTGATCA CCGGATTTTA TATCTCGTGG CCATTTTTAG TGGCGCCTGC CAGCACTGAT GTACTGGTAC AAGGTTGGAT CCGATTTGCG CATATCATTT TTGGATTTGT GCTCACCAGT ATCACTTTGG TGCGTTTTTA TTTGTTTTTC TTCAGTCGCA ACAACATTGA AAGACGTTCG TTTAAAGATG TGCTGAGTGT GAAAAGCTGG ATAACACAAT TAAAATCCTA TTTATGGATG GGTAATTTGC ATAAAGCTGG GGTTTACGGA CCGTTACAGT TTATGACTTA TGTGGCGATT TCGTTTGTTG CCTTGATTGT GTGTATCACA GGCTTAGTGC TGTACGCCAA TGTGTACCAC TTAGGCCTGG GCGGGTTACT TGGCGATGTA TCTGCATGGT TAACAGCACT TTGTGGCGGC TTAGCATCAC TTAGAACCTT CCACCATTAT TTAACTTGGG CTTTCATTAT TTTTGTGGTG ATCCATGTGT ATATGGCGGT GTGGTCGGGT ATTCGCTTTA AACATAATTC AGTCGACTCA ATAGTGTCTG GCTATGACTA TCACAAAGAT CATAAATAA
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Protein sequence | MEHIATHNRQ LIFTPAIRIF HWLRALAILV LVITGFYISW PFLVAPASTD VLVQGWIRFA HIIFGFVLTS ITLVRFYLFF FSRNNIERRS FKDVLSVKSW ITQLKSYLWM GNLHKAGVYG PLQFMTYVAI SFVALIVCIT GLVLYANVYH LGLGGLLGDV SAWLTALCGG LASLRTFHHY LTWAFIIFVV IHVYMAVWSG IRFKHNSVDS IVSGYDYHKD HK
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