Gene Sfri_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2102 
Symbol 
ID4279014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2502260 
End bp2502913 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content39% 
IMG OID638134891 
Producthypothetical protein 
Protein accessionYP_750786 
Protein GI114563273 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACA ACCAAACTTT TCGTGAACAT GATTTCTCAC AACAACTTTT ACCTGAAACC 
ACATTTGAAA ATTGTCATTT CTATCATTGC GACTTCAGTC GTGCAGACTT AAGGGATGCA 
ACATTCATCA ACTGTAAGTT TATTGAAGCA GGAGACAGTA TAGGTTGCCA ATTTAAGTAC 
GCCGATTTGC GTGATGCCAG TTTCAAACAT TGCAAGCTAG GCATGGCCAA CTTTCAAGGT 
GCTAATGGTT TTGGAGCCGA GTTTAGAGAA TGTGATTTAC AAGGAGCCAG TTTTTTAAAA 
ACCAGCTTTG TAAACCAGAT TTCACACAAA AGTTATTTTT GCTTGGTGTA TATTACCGGC 
TGTAATTTGT CTTATACCGA CTTTGAAAAG CAATGCATTG AAAAATGTGA CTTGTTCGAA 
AACCGTTGGA CGGGCGCCAA TTTACAAAAG GCCTCTTTTA AAGGTTCAGA TTTAAGTCGC 
GGTGAATTTT CATCCAATAA CTGGCAACAA TTTGATATGC AATATTGTGA TCTATCACAT 
TGTGAATTAA CCGGTTTGGA TCCTCGTCGA GTTAACTTAA CCGGGGTCAA AATCTGCGAC 
TGGCAACAAG AGCAATTATT AGAGCAACTC GGCGTTATCG TTTTACCTAG TTAA
 
Protein sequence
MSNNQTFREH DFSQQLLPET TFENCHFYHC DFSRADLRDA TFINCKFIEA GDSIGCQFKY 
ADLRDASFKH CKLGMANFQG ANGFGAEFRE CDLQGASFLK TSFVNQISHK SYFCLVYITG 
CNLSYTDFEK QCIEKCDLFE NRWTGANLQK ASFKGSDLSR GEFSSNNWQQ FDMQYCDLSH 
CELTGLDPRR VNLTGVKICD WQQEQLLEQL GVIVLPS