| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2100 |
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| Symbol | |
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| ID | 4279012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2500027 |
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| End bp | 2500863 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638134889 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_750784 |
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| Protein GI | 114563271 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAGATA ATATAACTTT GATCGTCGAT TTCTTTCTTG AACACAAATT ATTATTAACG
GTGTTAATAA TAATGCTTAT CTCAATGATA AAACGTTTTA TCATTTCAAG TATTCGTGGC
GACGTCGCTT TTCTTTCTGA TGTGCAACGG AAATGGATGT CACGCACTAA AAATGGCACC
TTCATTTTAA TACTGGTTAT TTTGTTCATA CTTTGGCAAT CCGAAGTTAG CAAATTTGCC
CTGTCAGTCA CCGCCATTGC CATTGCCATA GTGATAGCAT CAAAAGAAAT CATTCTTTGC
TTTACCGGCT CCATACAACG CGCGAGTTCA CGTTCATTTG TGATTGGTGA TTGGATTGAA
GTGGGAAAAA TATATGGCGA AGTGATTGAA CATAACTTAA TGGCCACAGT GATCCAAGAG
ATCGACCTCG ATCAAGGTCA ATACCATTAC ACAGGAAAAA CCGCGACGTT ACCTAACAGT
ATGTTTTTTA CCTATGCGGT TAAAAACCTC AACTTTATGA AACGTTATGT TTACCACAAC
ATAACGATTA CCGTAGTTCA GTTTGTTAAT CTCTATACAC TGTTTCCGTC GTTAACCCGT
CAAATAGAAC AGCACTGTGA AGACTTTATT GAAGTGGCTA AGCGTTACAA CGGCGTAATA
GAAAAACATG CTGGTGTCGA TTTACCTGGC AGCGAACCGC ATATTCATAT CACTAGCGGC
ATTAACGGCG AGCAAAATGT GCATATTATG ATTTTTTGCC CCACAGAGCG CGCCATACAT
TTAGAGCAGT TAATAAGAGA AGACTTTATG ATTGCTTACC ACGAAAACTT TAGTTAA
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| Protein sequence | MIDNITLIVD FFLEHKLLLT VLIIMLISMI KRFIISSIRG DVAFLSDVQR KWMSRTKNGT
FILILVILFI LWQSEVSKFA LSVTAIAIAI VIASKEIILC FTGSIQRASS RSFVIGDWIE
VGKIYGEVIE HNLMATVIQE IDLDQGQYHY TGKTATLPNS MFFTYAVKNL NFMKRYVYHN
ITITVVQFVN LYTLFPSLTR QIEQHCEDFI EVAKRYNGVI EKHAGVDLPG SEPHIHITSG
INGEQNVHIM IFCPTERAIH LEQLIREDFM IAYHENFS
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