Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2097 |
Symbol | |
ID | 4279009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2497147 |
End bp | 2497854 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638134886 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_750781 |
Protein GI | 114563268 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGTG AAGTAGTTTT AATTTCCGGT GCGAATAGAG GCATTGGTTT AGCGTTAACT GAGCAATATC TTATCAACGG TTGCAGCGTC ATAGCGACCT GTAGAGATAT CGCTACAGCG ACTGGGCTTA TGACGTTAAA GGCTCATTTT GCTGACAAAT TATTGATTGA GTCAGTGGAT ATCACGAGCT CTGAATCAAT CCAACGCTTA GCGAATAATC TCAGCCAGCA AAATATTAGT CTCGATTTAA TTGTTAATAA TGCGGGCTTT TTAGATCGAG ATAATCACAG TATTCATGCG ATCGATTATG CTGACGCTGA AATGTGTTTT AAAGTAAACG CGCTCGGGCC ATTATTTTTA ACCCATTGTT TAATAAACCT GCTGAATAAA ACACGTTTAT GCAAAATAGC GATTATCTCT TCTTCAAAGG GAGCGCTATC ACAAGAACAA GGTGTCGATT GGTATGGTTA CCGAATGTCT AAAGCCGCAG CCAATATGTT AACTGTGAAT TTAGCGACTG AACTGGTTAA TGCTAACGTC GCGGTGGTAT CTGTTCATCC TGGCTGGGTG CAAACTGATA TGGGCGGCAG CTCTGCAAGT GTTAGCGTTA ACGATTCCGC ACTTGGAATT ATCAAAGTGA TCAACAATTT ATCGATCCAC AATACCGGTC AGTTTTATGA TGTTAGCGGC GAACAACTGC CGTTCTAA
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Protein sequence | MNSEVVLISG ANRGIGLALT EQYLINGCSV IATCRDIATA TGLMTLKAHF ADKLLIESVD ITSSESIQRL ANNLSQQNIS LDLIVNNAGF LDRDNHSIHA IDYADAEMCF KVNALGPLFL THCLINLLNK TRLCKIAIIS SSKGALSQEQ GVDWYGYRMS KAAANMLTVN LATELVNANV AVVSVHPGWV QTDMGGSSAS VSVNDSALGI IKVINNLSIH NTGQFYDVSG EQLPF
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