| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2097 |
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| Symbol | |
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| ID | 4279009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2497147 |
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| End bp | 2497854 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134886 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_750781 |
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| Protein GI | 114563268 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGTG AAGTAGTTTT AATTTCCGGT GCGAATAGAG GCATTGGTTT AGCGTTAACT
GAGCAATATC TTATCAACGG TTGCAGCGTC ATAGCGACCT GTAGAGATAT CGCTACAGCG
ACTGGGCTTA TGACGTTAAA GGCTCATTTT GCTGACAAAT TATTGATTGA GTCAGTGGAT
ATCACGAGCT CTGAATCAAT CCAACGCTTA GCGAATAATC TCAGCCAGCA AAATATTAGT
CTCGATTTAA TTGTTAATAA TGCGGGCTTT TTAGATCGAG ATAATCACAG TATTCATGCG
ATCGATTATG CTGACGCTGA AATGTGTTTT AAAGTAAACG CGCTCGGGCC ATTATTTTTA
ACCCATTGTT TAATAAACCT GCTGAATAAA ACACGTTTAT GCAAAATAGC GATTATCTCT
TCTTCAAAGG GAGCGCTATC ACAAGAACAA GGTGTCGATT GGTATGGTTA CCGAATGTCT
AAAGCCGCAG CCAATATGTT AACTGTGAAT TTAGCGACTG AACTGGTTAA TGCTAACGTC
GCGGTGGTAT CTGTTCATCC TGGCTGGGTG CAAACTGATA TGGGCGGCAG CTCTGCAAGT
GTTAGCGTTA ACGATTCCGC ACTTGGAATT ATCAAAGTGA TCAACAATTT ATCGATCCAC
AATACCGGTC AGTTTTATGA TGTTAGCGGC GAACAACTGC CGTTCTAA
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| Protein sequence | MNSEVVLISG ANRGIGLALT EQYLINGCSV IATCRDIATA TGLMTLKAHF ADKLLIESVD
ITSSESIQRL ANNLSQQNIS LDLIVNNAGF LDRDNHSIHA IDYADAEMCF KVNALGPLFL
THCLINLLNK TRLCKIAIIS SSKGALSQEQ GVDWYGYRMS KAAANMLTVN LATELVNANV
AVVSVHPGWV QTDMGGSSAS VSVNDSALGI IKVINNLSIH NTGQFYDVSG EQLPF
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