| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2087 |
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| Symbol | |
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| ID | 4278999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2480084 |
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| End bp | 2482231 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638134876 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_750771 |
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| Protein GI | 114563258 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.167702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT CAGATTTGGG TCTAAAACCA AAGTATGATT CGGATGAGGA TGATATTCTT
AATAGTTTTC ATATTAAGTT GTTGTCACAA GCAACTGCAT ATGATCGTGC CGTAGGGTAT
TTTTCATCCG ATGTTCTTGC ATCAGCAGCT ATTGGACTTG AGAAGTTTAT TCTTACCAAT
GGAAAAATGA GATTGATAAT TGGTGATCCT TTATCTGACA GAGAATATGA AGCTGTTATG
GAAGGAGTGT TAAACCCTGC CTGCGAAAGA TCTACGGAAT TGAGTGAATT ACTTATTCAA
ACCAATGACT CTAAACTACG TCTGTTGACA TATTTGATTG CTAATCAGCA GTTAGAAATT
AAATTTGCTT TTACTCATCA AGGAATGTTT CATAAAAAAA TTGGCATTTT CTACCTAGAT
GAAGAGGTTG TTGTTTTTAG TGGTTCGGCT AATGAAACTT TAGCAGGCCT CTCTAAATAT
AATTCAGAAG AAATTTCTGT ATTTTTTAAT TGGCGTGAAT CTTTTGCGGA ATATGGACAA
GTGGAAGTTG ATAATTTCAA CTCTCTTTGG GATAACAAGA AGCAAAGAGC TAAGGTGATT
GCTTTAGACT CCGACGCATA CAAAAAAATT CAAGCTAGAG TGGATCTAAA ACAATTACGT
AAAGAGATTT TTGGGCATTT AGATTTAAAT GCAGAACCAT TTTTTAGTTA TAGTTTTCCT
AAATCTGATA AAAGTCTAAC GAAGCCTAAT ATCGAAACTA AATTACCTCG TAAACCCTTA
ATGGTAAAAG GCAAGGCATT TGGGTTGTTT TCGCATCAGT TAGAAGCAAT TGAAAGTTGG
GTCAAGGCCG ATTATAAAGG GCTTTTTAAA TTGGCTACAG GGTCTGGCAA AACATTCACA
TCTATTTGTG CAATGGTTGA TTTATATGAG TTACGTCATA AAAAGCAGTT GCCAACATTT
GTTATTATTA GTGTTCCTTA TATTGAACTA GCTAATCAAT GGGTTGATGA GCTTACTGCA
TTCAATATTA CTGCAGTGAA GTGTTACGAA AGCAGTCAAC AATGGTCTTC CGTCTTAGAT
AAAAAGATTT TAAGATTTCG AACCGGTGTA TTAGATTTTG TTTGTATTGT TGTAGTTAAT
AAGACCATGT CTTCGGATAT GTTTATTTCA AAGCTTAATA AGATACCACA TGATGATATG
TTATTGATTG GTGATGAGTG CCATCACTTA GGAAGTGAGG GGTTATCTGT TTCCCTTCCT
CAATGTAAAT ATCGTTTAGG TCTTTCTGCT ACCCCATTTC GAAGTGAAGA TGACGAGATA
GAGGGATCTC CGTTTGCTGA TACTGTGAAG CAAAATTTGC TTGCTTACTT TCATGGTATT
GTTAGCGAGT ATTCTCTAAG CGACGCTATA AGAGATGGTA TTTTAGCCCC TTATAAATAC
GACTTAGTGC CAGCATATCT GGATGATGAT GAACAGGAAC TATACGAAGA TTTCTCATCT
AAGATTTTAA AGTTATTTTT AAAGTCTAGA GGAGGTAGTT TAACGTCTGA GGAGAAAGTA
ATTCTAACAA GTCTTTGTGG TAAGCGTTCA AGATTGCTTG CAACTTGTAA AGGTAAGTTA
CCGGCTTTGA TTAACTACAT TAGTCTTCAT CCTGAGATGT CATTAAAGCA TTCTTTAATT
TATGTAGGTG AAGGTTACGC TATTGATGAT GATGTTCCGT ATATTACTCG AGTTACAAAT
CGTTTACATG AACATGGATG TCGAGTAGCT AAATTTACAT CACTAGAAAA TAGTTCTGAG
CGTCGACAGA TTATGACTGA CTTTATCAAT CAAGTTACTG ATTCTTTAGT TGCTATGAAA
GTATTAGATG AAGGCATCGA TGTTCCTGTT TGTAGAAGTG CTTTTATCTT GGCAAGTACT
CGAAACCCTC GACAGTATGT TCAACGCAGA GGACGAGTTC TCAGAAGATC TGAAGGAAAA
AGTGAAGCAT TAATTGTTGA TTTTGTTGTT CTACCTCGGC CTGGAGTTCT TAGTAATGCA
AGTCAAAATT TACGTAAAGC AGAATTAACC AGAATTAACG ATTTTAAATT AACAGCCCTC
AACCGTAAAT ATGTTGAGAA AAGAGTTATT GAATTAGGTA TTTGCTAA
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| Protein sequence | MSFSDLGLKP KYDSDEDDIL NSFHIKLLSQ ATAYDRAVGY FSSDVLASAA IGLEKFILTN
GKMRLIIGDP LSDREYEAVM EGVLNPACER STELSELLIQ TNDSKLRLLT YLIANQQLEI
KFAFTHQGMF HKKIGIFYLD EEVVVFSGSA NETLAGLSKY NSEEISVFFN WRESFAEYGQ
VEVDNFNSLW DNKKQRAKVI ALDSDAYKKI QARVDLKQLR KEIFGHLDLN AEPFFSYSFP
KSDKSLTKPN IETKLPRKPL MVKGKAFGLF SHQLEAIESW VKADYKGLFK LATGSGKTFT
SICAMVDLYE LRHKKQLPTF VIISVPYIEL ANQWVDELTA FNITAVKCYE SSQQWSSVLD
KKILRFRTGV LDFVCIVVVN KTMSSDMFIS KLNKIPHDDM LLIGDECHHL GSEGLSVSLP
QCKYRLGLSA TPFRSEDDEI EGSPFADTVK QNLLAYFHGI VSEYSLSDAI RDGILAPYKY
DLVPAYLDDD EQELYEDFSS KILKLFLKSR GGSLTSEEKV ILTSLCGKRS RLLATCKGKL
PALINYISLH PEMSLKHSLI YVGEGYAIDD DVPYITRVTN RLHEHGCRVA KFTSLENSSE
RRQIMTDFIN QVTDSLVAMK VLDEGIDVPV CRSAFILAST RNPRQYVQRR GRVLRRSEGK
SEALIVDFVV LPRPGVLSNA SQNLRKAELT RINDFKLTAL NRKYVEKRVI ELGIC
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