| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2085 |
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| Symbol | |
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| ID | 4278997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2477813 |
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| End bp | 2479873 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638134874 |
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| Product | DNA repair ATPase-like protein |
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| Protein accession | YP_750769 |
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| Protein GI | 114563256 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0395547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA TTAAATTAGA GATAAATAAT TTCCGTCAGT TTTATGGTAA ACAGATCATT
GATTTTGCAT CTGAGAGCAA TAAAGGGGTT ACTCTGATTC ATGGAGAAAA CAATGGCGGA
AAAACCGCAC TATTGAATGC TTTACGCTGG TGTTTATATG AAGAAACAAC AGATAATTTG
CAAGACTCTA AACATCTATT GAATAAACAT GCATTATCAC AAGGAATTAA CACTTTTAGT
GTGTATATCC AACTAGTTCA TGAAAATCGT TTGTTAGAAA TAAGAAGAAC AAAATCACGT
TCAAAATCAG ATAGTAACCT TCAAGTTTTT GAAATTAAAG AGGGGTGCTA CTCACAACAA
CAAGAGAAAA ACCCAAACAC TTTAATTAAT ACTCTATTAC CGAAAGAAAT GTCTCAATAT
TTCTTTTATC AAGGAGAGGG AACAGGAACC CTAAATAGTC AAAATGATTT TTCACATATC
AAGTCTGCAA TAAGTAAAGT CCTTGGTTTA ACTGTCTCTG AGAAAACATT AACTCACTTG
AATGGTATAA AAATTACTTA TCAGAAAGAA TTAAGACAAT TCGATACTAA TAACGAAATT
GAACATAATC TTTCCAATAA AGAACTTTTA GAAGCTAACT TAATTAAAAA TCAAGTTGAG
TTTGAACAAA AAAAAGCGCT TTTAGAGGTT GCGGAAAAAG AGTATGAATC CCAAATTACT
AATCTTGCAC GCTTTGACAA AACCTCCATA GATGAGAAGT TACAGATTAG AAAGCATCAA
GAACAGATTT TGTCTGATCT TGAAAGACAA CTTATTCGAT TACTCGCTGA TAAATCTAAA
TCAATTCTTA ACTGGATTAA TAATTCATAT AGTAAGAAGT TAGGGGAGAT CGAACTCTCA
AAAATTGACA TCGCGGAACT TAATAATTCG TCACGTTATA CAGTCGATAA ACAGTTAATT
AAAGCTATTA GAGCTAATCA AGAGTGCATT TGTGGCGCAG CTATTAAAAA TAATAGCTCG
GCAGCTGAAA TAATTGCACA ATTGGAAAAG TCTGCTGTCG ATCCTGAGCT TAAGCGTCGA
TGGCAAAGAG CTGAAGAATT ACATACTAAT CTTGCAAGTT TTTCATCCCC TAAGCAAGCA
ATGGCTAACC TTCTGAGTCA GATTGACGAT TGTCAAGATC GAATTAGTGA GCTTAAAAAA
AGTATAAATG AACTTAGCCA TACAATTGTC GAATCTGATA TAGATGATAT TAAAATAATC
GAAAACAAAA GAGAATCAGC TAAAAGAGAA TGTAATCAAT TAAGAGATCA AATACCTAAA
TTAGAGGTTA AGATTCGTCA AGCGACAGTT GATATAAAAG ATATCGATAG TAAAGTCATG
CGTCTTTCAT CAACACAACC TAGAGCTGAT AAGTTTAGAA GTTTGATTAT TGCAACAGAT
AAAATAATAG AACTTTTCAA TAAATCTATT AGTTCATCTA AAGAAGGGGT AGATTTAATT
TTATTGAAAA AGATGCAAGA ATTTTTTGGT CGTGTTGCAT TCAACGGTTA TACAGTTAAA
AAAGATTCTA GTTCAGGGAG TGGTAGCTTT ACTTGGACTA TTGTGGATAA GGAAGGAAAA
CGTGTTGCTG CAGGTAATGG ATATCAAGCC ATGTTGTCAA TTTCTTTTAT TGTTGCTTTA
ATTCAATTCT CAAAAGGCAG GGTAAATAGT AAACAGCATC TTTTAACCCC CGGGACAATT
GCTCCTTTTA TTGCAGATTC TATTTTAGCT TTTATCGGGC CGGATAATGG ACGTGAATTG
GTTCGTTACA TAGCTGATTC TGTCGAACAA TCTATATTCA TGTTTTCACA AGCACAATGG
ACGGAAAAAC ATACAGATAT AGGTATTCGC GATAAAATAG GTAAAGAATA CAACTTAGTA
CAGCATACAG TGTTAACAGA GAAAGAGTTT AAGGGGCAAT ACCCTACTAA ATTAATTGTT
CAAGGCAAGG AACACGATGT TGTTCGATTT GGTAGTGAAT TTGATAAAGT AACAATTGAA
GAGGTTCTTA CTAATGGCTG A
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| Protein sequence | MKLIKLEINN FRQFYGKQII DFASESNKGV TLIHGENNGG KTALLNALRW CLYEETTDNL
QDSKHLLNKH ALSQGINTFS VYIQLVHENR LLEIRRTKSR SKSDSNLQVF EIKEGCYSQQ
QEKNPNTLIN TLLPKEMSQY FFYQGEGTGT LNSQNDFSHI KSAISKVLGL TVSEKTLTHL
NGIKITYQKE LRQFDTNNEI EHNLSNKELL EANLIKNQVE FEQKKALLEV AEKEYESQIT
NLARFDKTSI DEKLQIRKHQ EQILSDLERQ LIRLLADKSK SILNWINNSY SKKLGEIELS
KIDIAELNNS SRYTVDKQLI KAIRANQECI CGAAIKNNSS AAEIIAQLEK SAVDPELKRR
WQRAEELHTN LASFSSPKQA MANLLSQIDD CQDRISELKK SINELSHTIV ESDIDDIKII
ENKRESAKRE CNQLRDQIPK LEVKIRQATV DIKDIDSKVM RLSSTQPRAD KFRSLIIATD
KIIELFNKSI SSSKEGVDLI LLKKMQEFFG RVAFNGYTVK KDSSSGSGSF TWTIVDKEGK
RVAAGNGYQA MLSISFIVAL IQFSKGRVNS KQHLLTPGTI APFIADSILA FIGPDNGREL
VRYIADSVEQ SIFMFSQAQW TEKHTDIGIR DKIGKEYNLV QHTVLTEKEF KGQYPTKLIV
QGKEHDVVRF GSEFDKVTIE EVLTNG
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