| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2080 |
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| Symbol | |
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| ID | 4278992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2472836 |
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| End bp | 2473714 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134869 |
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| Product | 6-phosphogluconate dehydrogenase, NAD-binding |
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| Protein accession | YP_750764 |
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| Protein GI | 114563251 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.428892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAC CAGTCATCGG TTTTATCGGC CTTGGCCTTA TGGGCGGCAA CATGGTTGAG
AACTTACAAA ACAGAGGTTA CCAGCTAAAT GTAATGGACC TTAACAAAGA AGCGGTTGCT
ACATGTGTTG CTCGCGGTGC AAAAACCGTA ACGACAGCAA AAGAACTTGC TGCATCTAGC
GACATCGTTA TGCTGTGCTT AACCACATCT GCCGTAGTTG AAAAACTGGT TTATGGTGAC
GATGGTATTC TGGCGGGCAT TAAAGAAGGT TCTGTACTAG TTGATTTTGG TACATCAATT
CCTTCATCTA CGCGTAAAAT TGGTGCAGAC CTTGCAGCAA AAGGCGCAGG TATGATTGAT
GCCCCACTCG GCCGTACTCC TGCTCACGCT AAAGACGGTT TACTAAACAT CATGGCAGCT
GGCGATCTTG AGACCTTTAA TAAGGTTAAG CCAGTATTAG ACGAGCAAGG CGAAAACGTC
TTCCATTTAG GTGCATTAGG CGCAGGTCAC ACGACTAAGC TAATCAACAA CTTTATGGGT
ATGACTACCG TTTGTGCTAT GTCTCAAGCC TTTGCTGTTG CAGATCTTGC TGGTGTTGAC
CGTGCGCAAC TATTCGACAT TATGTCAGCG GGTCCATCTA ACTCACCGTT CATGAAATTC
TGTAAAAACT ATGCAGTAGA CGGTGTAAGC GATTTAGGCT TCTCTATTGC TAACGCAAAC
AAAGATCTTG GCTACTTCTT AAAAATGGTA GAAGACTTAG GCACAGAATC TAAAATTGCT
GAAGGTTCAT CTGCTAATCT ACAAGCTGCA TTTGACGCAG GTTTAGGTAA CGGCAACGTA
CCAGAAATTT TCGATTACTT TTTGAAGCTC GCTAAGTAA
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| Protein sequence | MTKPVIGFIG LGLMGGNMVE NLQNRGYQLN VMDLNKEAVA TCVARGAKTV TTAKELAASS
DIVMLCLTTS AVVEKLVYGD DGILAGIKEG SVLVDFGTSI PSSTRKIGAD LAAKGAGMID
APLGRTPAHA KDGLLNIMAA GDLETFNKVK PVLDEQGENV FHLGALGAGH TTKLINNFMG
MTTVCAMSQA FAVADLAGVD RAQLFDIMSA GPSNSPFMKF CKNYAVDGVS DLGFSIANAN
KDLGYFLKMV EDLGTESKIA EGSSANLQAA FDAGLGNGNV PEIFDYFLKL AK
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