Gene Sfri_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2065 
Symbol 
ID4278977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2448081 
End bp2448542 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID638134854 
Productdehydratase 
Protein accessionYP_750749 
Protein GI114563236 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACAG TCATCAATCG TAACGACATC ACAAACTATA TTGGCTTCCA AGCCGAGCCA 
ACAGGCTGGT ATCAAATCAC TCAAGATCAG ATTAATCAGT TTGCGGATTG CACACTGGAT
CATCAGTTTA TCCACGTAGA TGAAGAAAAA GCCAAAGCCA CGTCTTTTGG CTCGACCATT
GCCCATGGCT TCCTGTCACT TTCCATGTTG TCACATTTTG CTGAAGAATT TAGCGTCATC
ATTGACGGTT TTTATATGGG CTTGAATGCC GGTTTCGATA AGGTGAGATT TTTACAGCCG
GTTACCGTTA ATAGCCGCAT TAGAGCACAC GCTAAAACCC TTTCGATTGA AGAAAAGAAA
CCAGGACAAT TCCGTTTATC AACCGAAGTA ACCATTGAAA TTGAAGGTGT AGATACTCCG
GCATTAGTGG CTGAGTGGAT TTCTGTGCAA ATGGTCAAGT AA
 
Protein sequence
MPTVINRNDI TNYIGFQAEP TGWYQITQDQ INQFADCTLD HQFIHVDEEK AKATSFGSTI 
AHGFLSLSML SHFAEEFSVI IDGFYMGLNA GFDKVRFLQP VTVNSRIRAH AKTLSIEEKK
PGQFRLSTEV TIEIEGVDTP ALVAEWISVQ MVK