Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2062 |
Symbol | |
ID | 4278974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2444014 |
End bp | 2445684 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638134851 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_750746 |
Protein GI | 114563233 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGGA TTTGGCTAGA AAAGAGTTAT CCGCCTGGGG TTGAGTTTGA AATTGATCCA GATAAATACA ACTCGTTGGC AGATTTGTTT TTAAAATATA CCAAGTTATA TGCCACTAAT ACGGCGTTTA TCAACATGGA TGTCAGCATT ACTTATCAAC AGCTTGCCCA GCAAGCGACA GACTTTGCAG CCTATTTACA GCAAGACTTA GGGCTAGTGA AAGGCGATAA GTTTGCCATC ATGATCCCCA ATACACTGCA ATATCCTATC GCATTATTTG GTGCACTTAT CGCAGGCTTA ACTGTGGTGA ATGTTAATCC ACTGTATACC CCACGTGAAT TAGAACATCA ATTAAAAGAC TCTGGCACTA AAGCTATTTT AATTTTAGAA AACTTTGCCC ATGTATTGCA GGCAGTCATT GATAAAACCG ATGTTAAACA TGTTATCACC ACTGGTGTGG GTGACCGATT AGGCCTGATT AAAGGCGCAT TAGTTAACGG CGCGATTAAG CACGTGAAGA AATTGGTGCC AGCGTTCGAT TTACCTAATG CGGTTAAATT TAATGACGCC ATGGCAAAAG GCAGCAAACA AACCTTTAAG CCAGTTGATG TTATCGGTTC TGACTTAGCC TTTTTACAAT ACACTGGCGG CACTACAGGC CCTTCAAAAG GTGCCATGCT GACTCACCGT AATATGGTTG CCAACCTTGA GCAGTCCAAT GCGGTTACCA AGAACGTTTA TGAAATAGGC AAAGAGCTGA TTATCACTGC ATTGCCGCTT TATCATATCT ACGCACTAAC CTCTAATTGC TTAGCCTTCT TGCCATTTGG TGGCACTAAC TTATTAATCA CCAACCCAAG AGACATGGCC GGCTTTGTTA AAGAACTGGC TAAATATCGC TTTACCGTGA TTACGGGTGT GAACACCTTG TTTAACGGAC TGTTGAATAC TCCAGGGTTT GATCAACTTG ATTTCAGTGC ATTAAAAATG GGTTTTGGCG GCGGAATGTC GGTGCAAAGG CCGGTTGCAG AACATTGGGA ACGAGTGACT AAAAGTCGTT TACTTGAAGG CTATGGATTA ACAGAATGTG CGCCATTAGT GACAATGAGC CCTTATAACC AAAAAAGCTA CAACGGCTCG ATTGGCTTAC CGGCATCATC AACCGATATT CGTTTAGTGG GTGCCGATGG TGAAGATGTT GCATTAGGTG AACCTGGTGA AATGTGGGTT AAAGGCCCGC AAGTAATGAA AGGCTATTAC AATCGCCAAA AAGCCACCGA TGAAGTATTA ATCGATGGTT GGTTGGCAAC CGGTGACATT GCCACTATGG ACGAAAATGG TTTCTTTAAG ATTGTTGACC GTAAAAAAGA CATGATTAAC GTGTCTGGTT TTAATGTGTT CCCTAACGAA ATTGAAGAAG TGATAGTGTC TCATGAAGGC GTACTTGAAG CCGCTGCGGT GGGTGTATCT TGCGATATTA CTGGCGAGCG CGTCAAAGTG TATATCGTGC GTAAGGACCC AACATTAACA GAACAAGATA TTTTTGATCA CTGCAACAAA ATGCTGACTA ACTATAAACG TCCTAAAATC ATTGAGTTTA TGAATGAATT GCCTAAAAGC AATGTGGGTA AAGTATTGCG TAAAGATCTT CGGAATCAGG CACAAGCATA A
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Protein sequence | MERIWLEKSY PPGVEFEIDP DKYNSLADLF LKYTKLYATN TAFINMDVSI TYQQLAQQAT DFAAYLQQDL GLVKGDKFAI MIPNTLQYPI ALFGALIAGL TVVNVNPLYT PRELEHQLKD SGTKAILILE NFAHVLQAVI DKTDVKHVIT TGVGDRLGLI KGALVNGAIK HVKKLVPAFD LPNAVKFNDA MAKGSKQTFK PVDVIGSDLA FLQYTGGTTG PSKGAMLTHR NMVANLEQSN AVTKNVYEIG KELIITALPL YHIYALTSNC LAFLPFGGTN LLITNPRDMA GFVKELAKYR FTVITGVNTL FNGLLNTPGF DQLDFSALKM GFGGGMSVQR PVAEHWERVT KSRLLEGYGL TECAPLVTMS PYNQKSYNGS IGLPASSTDI RLVGADGEDV ALGEPGEMWV KGPQVMKGYY NRQKATDEVL IDGWLATGDI ATMDENGFFK IVDRKKDMIN VSGFNVFPNE IEEVIVSHEG VLEAAAVGVS CDITGERVKV YIVRKDPTLT EQDIFDHCNK MLTNYKRPKI IEFMNELPKS NVGKVLRKDL RNQAQA
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