| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2059 |
|---|
| Symbol | |
|---|
| ID | 4278971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 2439514 |
|---|
| End bp | 2441628 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638134848 |
|---|
| Product | molybdopterin oxidoreductase |
|---|
| Protein accession | YP_750743 |
|---|
| Protein GI | 114563230 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA TAAAAACCCA TTATAGAAAT TGCAATATTT GTGAAGCCAT GTGTGGCTTG
GAAATCAGCT ATCAAGACAA ACAGATTTTG TCGATCAAAG GCGATCAACT CGATCCCTTC
AGCCAAGGCT ATAACTGCCC TAAGGCGTTG GCTTTAGAAG ATTTTTATAC CGACAAAGAT
CGCTTAAAAA CACCGATTAA GCGTACCGGT TCTGGCTGGA AAGCCATTAG TTGGGATGAC
GCATTTAGCG AAATTACCGA TAAGTTCAAA AGTATTCAGC AGCAACATGG CAAAAATGCA
TTAGCGGTGT ATTTAGGTAA CCCTAATGCG CATAGCTTAG GCAATGCATT GGTGCTTAAA
CCTTTTATGA AGTCGCTTGG TACCGTGAAT CGGTTTAGCT CAGCTTCGGC TGATCAATTA
CCTCATCATG TTGCGTCTAA CTTTATGTTT GGCGCAGGCA TGTTAATTCC GGTTCCGGAT
ATTGATAGAA CTGACTTTAT GTTGATCATT GGCGCTAATC CGGTGGTATC AAACGGCAGC
ATGATGACCG CGCCCAATGT GATAGGGCGA ATGAAAGCGA TTCAAAAACG TGGTGGAAAA
ATTGTTGTAG TGGACCCGCG TAAAACCCGC ACCGCTAAAA TTGCTGATCA GCATTTATTT
ATTCGACCTG AAAAAGATGC ACTGTTGTTA CTGGCATTAA TTCACTGTGT GTTTGCCAAT
GATAAAGTTA ATTTACGTCA TTTAGATAAC ATGGTTGAAG GGTTTGATGA GGTAGCCAAT
CTTGCCAAGG CCTATTCGCC AGAAGCCATA GCAGAATTTG TCGGTATTGA TGCTGTAAGT
ATTCGCATGC TTGCAGATGA CATGGCAGCT GCAGACTCTG CGGTGTGTTA TAGCCGCATG
GGCGCGTCAA CTCAAACGTT TGGCGGCTTA TGTTTATGGC TCACCAATGT GCTCAATATT
ATTACCGGCA ATTTTGACCG TGCCGGTGGG GCGATGTTTC CACAACCCGC TTTTGATTTA
TTACGCAATC ATAAACGTGG CCATAAAAGC TCATTTGGTC AACATCAAAC TCGTGTTCGT
CAATTGCCAT TCTTTAATGG CGAGTTTCCG GTAGCAACCT TAGCAGAAGA AATACAAACC
GAGGGTGAAG GGCAAATTAA AAGCCTCATC ACTGTCGCGG GCAATCCTGT TTTGTCAGCG
CCCAGTGGCC ATAAATTGGC ACAAGCTTTT GCAGGCCTTG AATACATGGT GTCGGTTGAT
ATCTATTTAA ATGAAACCAC TAAATACGCA GACATTATTT TACCTGGCAC CACAGGAGTA
GAGAACTCCC ACTTTGATAT TTTCTTTAAT TCATTTTCGG TGCGCAACAC GGTCAAATAC
TCAGCACCAT TATTTGAAAA AGAGCCTGAT CAACGCAGTG ATTGGCAAAT ATTAAAAGAG
ATATCAGCCA GAATGCTAAA CCTGCCTGCC GATGACCCAA TGCAAAACGT TACCCCAGAA
ATGATACTGG ATATGGAGCT TAAAAAGGGC CCGTATGGCG ATCAAGGCAT CAGCTTGCAA
GCGTTAATCG ACAATCCGCA TGGTATTGAC CTTGGCCCAT TAATGCCCTG TATCGAACAA
CGCATTAAAA CCGAAAATGG TAAGGTTAAT TTATTCCCGC AAGTGTATGT TGATGACTTA
CCACGCTTGA ATGCCGTGAT GACTCAAGCA GCTCGTGATA ACAGATATCC ATTTGACTTA
ATTGGCCGAC GATTAGTGAA AAGTCATAAT ACTTGGACAC AGAACTCTGA GCGGTTAACT
AAGGGTAAAA ATCCGTGTAC TTTAGAAGTG CATTCTGAAG ATGCTAAACA GCTTGGGATA
ACACAGGGGC AAATCGTGTC AGTCAGTTCT GCCGTTGGCC AAATCAAAAT CGAAGTGACA
ATTACCGACG ATATTCAACA AGGTGTTGTG AGTATGCCGC AAGGGTGGGG CCATAATCAG
CAAGGCACCA ATATGTCGGT GGCTTCTGCC CAACCTGGTG TGAGCATTAA TGATTTAACG
GATGCGGCTA GAGTTGATAT GCTAACGGGA AATGCAGCAT TTAATGGCAC TCCAGTGGCC
ATTCACGTGG CTTAA
|
|---|
| Protein sequence | MSDIKTHYRN CNICEAMCGL EISYQDKQIL SIKGDQLDPF SQGYNCPKAL ALEDFYTDKD
RLKTPIKRTG SGWKAISWDD AFSEITDKFK SIQQQHGKNA LAVYLGNPNA HSLGNALVLK
PFMKSLGTVN RFSSASADQL PHHVASNFMF GAGMLIPVPD IDRTDFMLII GANPVVSNGS
MMTAPNVIGR MKAIQKRGGK IVVVDPRKTR TAKIADQHLF IRPEKDALLL LALIHCVFAN
DKVNLRHLDN MVEGFDEVAN LAKAYSPEAI AEFVGIDAVS IRMLADDMAA ADSAVCYSRM
GASTQTFGGL CLWLTNVLNI ITGNFDRAGG AMFPQPAFDL LRNHKRGHKS SFGQHQTRVR
QLPFFNGEFP VATLAEEIQT EGEGQIKSLI TVAGNPVLSA PSGHKLAQAF AGLEYMVSVD
IYLNETTKYA DIILPGTTGV ENSHFDIFFN SFSVRNTVKY SAPLFEKEPD QRSDWQILKE
ISARMLNLPA DDPMQNVTPE MILDMELKKG PYGDQGISLQ ALIDNPHGID LGPLMPCIEQ
RIKTENGKVN LFPQVYVDDL PRLNAVMTQA ARDNRYPFDL IGRRLVKSHN TWTQNSERLT
KGKNPCTLEV HSEDAKQLGI TQGQIVSVSS AVGQIKIEVT ITDDIQQGVV SMPQGWGHNQ
QGTNMSVASA QPGVSINDLT DAARVDMLTG NAAFNGTPVA IHVA
|
|---|
| |