Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2054 |
Symbol | |
ID | 4278966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2434654 |
End bp | 2435412 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638134843 |
Product | IstB ATP binding domain-containing protein |
Protein accession | YP_750738 |
Protein GI | 114563225 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TCAATCAACA AGTCAATAAC CAGTTAAGTA ACTTAAAGCT AAGCGGCATA CGTGATGCGC TATTACAGCA ACTTGAACAA CCTAATCTAT ACGTAGAACA AAGCTTCGAA GAGCGGCTAA GTTTATTGCT TGAGCATGAA ATAACGCAGC GTGACCAGCG TAAAATTGAC CGCCTAACTC GACAAGCAAA GTTCAGAGTT GGCGGCACGC TTGCTCAACT CAACTATGGC GCAGCACGAC AACTCGATAA AACTCAGATC CGTTCATTAG CACAAGGTGA ATGGCTTCGC CTTCACCAAA ATATTTTGAT TACGGGAGCA ACGGGGTGTG GCAAAACTTA CCTCGCTTGC GCTCTTGGTC AAAACCACTG CCAACAAGGG AGTAGCGTTT ATTATTTTAG GCTCAAGGAG CTATTAGAAA AGATGTTCTT AGCGCAAGCC GATGGTAGTT ATCGAAAACT GATCAACAAG CTTAGCTCTG CTAATTTACT GATCTTAGAT GATTGGGGAT TAGAGCCATT AACGGCTCAA CAACGTAGTG ATTTATTGGA ATTAATTGAT GCAAGATATG ATACAAAATC GACATTAATT GCCAGTCAAT TACCGATCGA AAATTGGTAT GAAATGATAG GAGAATCGAC ACATGCTGAT GCGATTCTAG ATCGACTTGT TCACGGAGCA ATAAAGTTGG AATTAAAAGG CGAATCGATG CGAAAAAAAC TAAATACCTT GACTGAAGCC GATCACTGA
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Protein sequence | MKNINQQVNN QLSNLKLSGI RDALLQQLEQ PNLYVEQSFE ERLSLLLEHE ITQRDQRKID RLTRQAKFRV GGTLAQLNYG AARQLDKTQI RSLAQGEWLR LHQNILITGA TGCGKTYLAC ALGQNHCQQG SSVYYFRLKE LLEKMFLAQA DGSYRKLINK LSSANLLILD DWGLEPLTAQ QRSDLLELID ARYDTKSTLI ASQLPIENWY EMIGESTHAD AILDRLVHGA IKLELKGESM RKKLNTLTEA DH
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