Gene Sfri_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2050 
Symbol 
ID4278962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2429661 
End bp2429972 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content43% 
IMG OID638134839 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_750734 
Protein GI114563221 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.575718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCGA TAACCAGAAA AACATTTAGT GCTGAATTCA AACTTGAAGC AGCCCAATTA 
GTCCTCGATA AAAACCATAG CATCATCGAA GCAGCAAAGG CGATGAACGT GGGTAAATCA
ACCATGGATA AATGGGTGAG ACAGTTAAAA CTAGAACGCC AGGGTGGCAC GCCAAAAGCC
TCTCCCATTA CCCCTGAACA AATTGAAATC CGTGAACTGA AGAAACAGGT AGCCCGTCTT
GAGGAGCATA ATCTTATTCT AAAAAAGGCT ACCGCTCTCT TGATGTCAGA CTCGATGAAC
AATTTACGCT GA
 
Protein sequence
MRSITRKTFS AEFKLEAAQL VLDKNHSIIE AAKAMNVGKS TMDKWVRQLK LERQGGTPKA 
SPITPEQIEI RELKKQVARL EEHNLILKKA TALLMSDSMN NLR