| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2048 |
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| Symbol | |
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| ID | 4278960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2426340 |
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| End bp | 2427443 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134837 |
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| Product | L-sorbosone dehydrogenase, putative |
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| Protein accession | YP_750732 |
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| Protein GI | 114563219 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.228554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAAT CAATTAGTTT ATGTTCAACC TTAATCATAG CAATGGGTGT CTCTTATCCA
TCATTTGCAT TACCACTGGA TAAGATCAAA TTACAAGAAG GGTTTACCAT CGATGTGTAT
GCCGAAAACT TAGAAAATGC ACGCCAGATG GCACTTGGTG ACAACGGAAC TGTTTTTGTA
GGCAGTCGTA AAGCAGGCAA TGTTTATGCG CTTATAGACA GTGATAATGA TTTTAAAGCT
GACAAGAAAA TCATTATCGC AACGGATTTG TTTATGCCAT CCGGTCTTGC TTACCATAAT
GGCAGTTTGT ATGTCGCTGA AGTCGATAAA ATCTGGCGTT ATCCTGATAT TGAACAATCA
TTACCCAAGA TCCCTAAACC AGAATTGGTG TACGACAAGT TACCTAACAA ATCCCATCAC
GGCTGGAAAT TTATCGCTTT TGGCCCAGAT GGAAAGCTGT ACATTCCCGT CGGCGCGCCT
TGCAATGTGT GTGAAAGTGA GCAGCCCTTT GCCAGTATTT TACAATTAGA TCTTGAAACA
AAACAAACCA CTATTGTAGC CCAAGGCGTA CGTAACAGTG TTGGATTTGA TTTCCACCCA
CAAACAGGTG AGTTATGGTT TACCGATAAT GGCCGCGACA TGATGGGCGA TGATTTACCC
GATGATGAGC TTAATCGTGT GAGCAAAAAA GGCCAACACT TTGGTTTTCC TTATATTCAC
AACACAGACA TTGCCGATCC GGATTTTACT AACCCCAAAA TCGCCACACT CAACACGCCT
CCGGTATTAA CCTTAGGTGC TCATGTTGCT GCATTAGGCA TGGAGTTTTA TCAAGGTAAT
CAATTCCCAG CGGCTTATAA GCAATCAATC TTAATTGCCC AGCATGGTTC GTGGAATCGC
ACTAACAAAG TGGGTTATCG CATTATGCAA GTGGCACTTG AGGGAAATAA GGTGATTGAC
TATAAGCAGT TTGCTACGGG TTGGCTTGAA GGTGAACAAA GCTGGGGCCG CCCTGTAGAT
GTGATGACCC TGGCAGATGG CTCTATCTTG GTATCTGATG ACTTTGCCAA TGCCGTGTAT
CGGATTAGTT ATACCAAGCA ATAA
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| Protein sequence | MMKSISLCST LIIAMGVSYP SFALPLDKIK LQEGFTIDVY AENLENARQM ALGDNGTVFV
GSRKAGNVYA LIDSDNDFKA DKKIIIATDL FMPSGLAYHN GSLYVAEVDK IWRYPDIEQS
LPKIPKPELV YDKLPNKSHH GWKFIAFGPD GKLYIPVGAP CNVCESEQPF ASILQLDLET
KQTTIVAQGV RNSVGFDFHP QTGELWFTDN GRDMMGDDLP DDELNRVSKK GQHFGFPYIH
NTDIADPDFT NPKIATLNTP PVLTLGAHVA ALGMEFYQGN QFPAAYKQSI LIAQHGSWNR
TNKVGYRIMQ VALEGNKVID YKQFATGWLE GEQSWGRPVD VMTLADGSIL VSDDFANAVY
RISYTKQ
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