| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2044 |
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| Symbol | |
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| ID | 4278956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2422744 |
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| End bp | 2423655 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638134833 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_750728 |
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| Protein GI | 114563215 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.104383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGATA TTGAATTAGT GACATTTGTT AACACGCAAG TTATCCCTGT TTGCATCTTT
TTAATTATGA TGGGCATGGG GTTGTCTTTA GTGACAGATG ATTTTAAACG CGTGCTTAAG
TACCCTAAAG CGGTTGCGAT AGGACTAACT AACCAGCTGC TTTTGTTACC TATTATTGGT
TTTGGATTAG CTAACATTAT GCCGTTAGAA CCAGAATACG CTGTAGGCGT TATGTTACTG
GTACTTTGCC CTGGCGGCAC GACTTCTAAT ATGTTTTCTC ACTTAGCAAA AGGTGATGTG
GCGCTGTCGG TCACGATGAC TGCGGTGGCC AGCTTAATTA CCGTGTTTAC TATTCCTGTA
GTACTTAACT ATTCGTTAAT TCACTTTATG GGGCAAGGCA ATGAATTTCA GTTGCCAATA
CTTACAACGA TGTTCAGCTT AATGAAGCTG ACTATTGTGC CTATTGTAAT TGGTATGATG
ATAAGACGTT ACGCACCTAA AATAGCAGAA AGCACTCAAG TTCATGTGTC ACGTTTTGGC
ATATTGTTTT TGACGTTGTT GATTATATTT TTAACGTATA TTCAGCAAGA TATCGTTATT
CCAGCACTTA TCGCCGCAGG GCCAGTATCG ATTATTCTTA ATATCTCAAC CATGCTACTT
GGATATTATT CAAGTAAATT GTTTGGATTA AATTTGGCGC AACGCACCTC GATTACGATT
GAAGTCGGCT TACAAAACAG TACCTTATCA ATGTTTATGG CATTAACACT GTTAGCTAAC
TACAAGATGT CTTTCACGCC CGCGATTTAC ACACTCACAA TGCTCTTTAC CGCAGGGATT
CTAGCGGGTA TGTTAAATTC AAAGTATTTT AAATCAAAAA GTAATAGTGA AGTGATGGCC
GATAACGCCT AG
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| Protein sequence | MKDIELVTFV NTQVIPVCIF LIMMGMGLSL VTDDFKRVLK YPKAVAIGLT NQLLLLPIIG
FGLANIMPLE PEYAVGVMLL VLCPGGTTSN MFSHLAKGDV ALSVTMTAVA SLITVFTIPV
VLNYSLIHFM GQGNEFQLPI LTTMFSLMKL TIVPIVIGMM IRRYAPKIAE STQVHVSRFG
ILFLTLLIIF LTYIQQDIVI PALIAAGPVS IILNISTMLL GYYSSKLFGL NLAQRTSITI
EVGLQNSTLS MFMALTLLAN YKMSFTPAIY TLTMLFTAGI LAGMLNSKYF KSKSNSEVMA
DNA
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