Gene Sfri_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2041 
Symbol 
ID4278953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2419677 
End bp2420339 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content43% 
IMG OID638134830 
Productnitroreductase 
Protein accessionYP_750725 
Protein GI114563212 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.505491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTG AATCAATATT GAAAAACCGT TCTTCAACAC GCGCCTTTCT TGACAAACCG 
GTTACCAAAG AAACCTTGGA TTTGATTTTT GCGCATGCAC AACTTTCACC TTCAAATTGC 
AACGTACAAC CATGGCAAAC CTGCGTGGTG TCTGGTCAGA CAAAAGACAC ATTGAAGCAA 
AAATTTATGC AAACTCTCAT GAGCGGTGCT TCACCTAATC CTGATTTTAA TTGGTTACCG 
CAATATCAAG GTGTACATCG TGACCGCCAA TTTGGCTCAG CAAATGCCTT ATACAGCTCA 
ATTGGTGTCG CACGTGAAGA TAAAAAAGCC CGCCAAATGG CGATGGTACG CAACTGGCAG 
TTTTTTGATG CGCCACATGC GGTGTTTTTC ACTATGGATA AATACTTAGA CATTATGGGC 
GCTGTTGATT TAGGTATATA TGCTCAAACC TTGTCATTGA TTATGGCTGA TCATGGCATA 
TCTAATTGTA TGCAAGGTGC ATTAGGGCAA TTCCCCGACC CAGTACGAGA AATACTAAAC 
CTCCCAGCCG AGCGCGGTAT TTTATTTGGG ATGTCATTTG GTTACGCCGA TGACAGTGCA 
GCGGTAAACA ATACCCGTAC CGATCGTGAA CCCATTGAAA ACGCAGTGGC ATTTTTCGAT 
TAA
 
Protein sequence
MSIESILKNR SSTRAFLDKP VTKETLDLIF AHAQLSPSNC NVQPWQTCVV SGQTKDTLKQ 
KFMQTLMSGA SPNPDFNWLP QYQGVHRDRQ FGSANALYSS IGVAREDKKA RQMAMVRNWQ 
FFDAPHAVFF TMDKYLDIMG AVDLGIYAQT LSLIMADHGI SNCMQGALGQ FPDPVREILN 
LPAERGILFG MSFGYADDSA AVNNTRTDRE PIENAVAFFD