Gene Sfri_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2033 
Symbol 
ID4278945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2407150 
End bp2408307 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content48% 
IMG OID638134822 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_750717 
Protein GI114563204 
COG category[C] Energy production and conversion 
COG ID[COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.200015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACT TTGACTTTCA CAACCCGACA AAAATTCTCT TTGGTAAAGG CCGAATCGAA 
CACCTTAACG ATCATATTCC AGTAGATGCA AAAGTATTGA TTATCTATGG CGGTGGTAGC
GCGGAACGAA CTGGTGTATT AGAACAAGTT AGAACAGCAC TATCTGGTCG CACATTAGTC
GAGTTTGGTG GTATAGAACC AAATCCTCGT TATGCCACGA CTCTTAATGC CGTCAAAGTA
ATCGTAGATA ACAACATCAC CTTTTTGCTT GCCGTTGGTG GCGGATCTGT CATTGATGCG
ACTAAATTTA TCGCGATGGC GTCGCTTTAT GTAGGTGACC CCTGGGAGAT CCTTACTGCC
GGCACTGCAA AAGTGACCGC GGCAATGCCG TTTGGAACTG TGCTTACATT GCCTGCAACA
GGATCTGAAA TGAACAATGG TGGGGTGATA ACCAACCCTG AGAAAATAGC CAAGCTTCCT
TTTAGAAGTC CACATTGCTA CCCAATTTTT TCGGTCCTCG ATCCTGAACT CACCTATACG
CTGCCTGCGC GTCAGATTGC CAATGGCGCT GCAGATGCCT TTGTCCATAT TATCGAGCAG
TATCTGACTT ATCCCAGTGG CGCACACGTG CAGGATGGTT TTGCCGAGTC TCTGCTACGC
ACCATTATTG AGCTTGGCCC TAAAGCGCTA GAGACACCAG AAGATTATGA CATTCGTGCA
AGTCTGATGT GGACAGCCAC ACTGGCTTTG AATGGATTAA TCGGTACCGG AGTGCCACAA
GATTGGGCTT CTCACATGAT CGGACATGAA ATCACCGCGC TCAATGATAC AGACCACGCC
CGTACTCTTG CCGTCGTGTT ACCGTCACTA TTGAATGATC AGCGTGGCCA CAAGCACGAA
AAATTACTGC AATATGCGAG CAATGTTTGG GGGATCACCG AAGGCACAGA TGCTGTGCGA
ATTGACGCAG CAATAGACGC TACACGTGCG TTTTTCGAGC AATTAGGGAT CAAGACTCGA
TTGAGCGACT ACGGTATTGC CGCAGCAGAA ATTGAACTTA TCGTTAGCGC TTTGCAGGAA
CATGGCATGA CAGCCCTTGG CGAACACAAA GACATCACCC CAACTGATGT CCGTCGCATT
CTTGAAGCGT CACTTTAA
 
Protein sequence
MNNFDFHNPT KILFGKGRIE HLNDHIPVDA KVLIIYGGGS AERTGVLEQV RTALSGRTLV 
EFGGIEPNPR YATTLNAVKV IVDNNITFLL AVGGGSVIDA TKFIAMASLY VGDPWEILTA
GTAKVTAAMP FGTVLTLPAT GSEMNNGGVI TNPEKIAKLP FRSPHCYPIF SVLDPELTYT
LPARQIANGA ADAFVHIIEQ YLTYPSGAHV QDGFAESLLR TIIELGPKAL ETPEDYDIRA
SLMWTATLAL NGLIGTGVPQ DWASHMIGHE ITALNDTDHA RTLAVVLPSL LNDQRGHKHE
KLLQYASNVW GITEGTDAVR IDAAIDATRA FFEQLGIKTR LSDYGIAAAE IELIVSALQE
HGMTALGEHK DITPTDVRRI LEASL