| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2019 |
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| Symbol | |
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| ID | 4278931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2391870 |
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| End bp | 2392799 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638134806 |
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| Product | universal stress protein UspE |
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| Protein accession | YP_750703 |
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| Protein GI | 114563190 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.865134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGATT ATAAAAAGAT ATTAGTGGTG ATTAATCCTA CAACGGATCA TCAACCCGCA
TTGGCACGTG CTGTTGAATT AGCGTCAAAA AGTCAGGCAG AGATAACTGC ATTTTTATCT
ATTTTTGACT TCTCTTATGA AATGACCTCA ATTTTGTCTA GTCAAGAACG TGAAGCAATG
CGCCAAGGTG TTATTGATCA ACGAGTCGCT TGGTTAGAAA ATGCCATTGA TGGTTTCAGT
AAACTCAATA TAAAAATTAA TACCGAAGTG GTTTGGCATA ACCGCCCTTT CGAAAGTGTG
ATTAACCATG CGATGAAAGG CAATTATGAT TTAATTGTTA AAAGCACCCA CGTACATGAC
AAATTAAAAG CCGTTATTTT TACACCGACT GATTGGCATT TAATGCGTAA ATCTCCTGTT
CCTGTTTTAT TAGTCAAAGA ACACGATTGG CCAGTGGCTG GTAAGATTAT TTGTGCGGTT
AATGTAGTGA CTGAAGATGA AGATCATCAA ACTCTTAATG GCAAAATTAT TAATCACGCT
CTCGATTTGG CCAAAAAATT CTCTGCCAGT GTTCACTTAG TTAATGGCTA CCCTGGTACG
CCAGTCAATT TGGCTATTGA ACTGCCCGAC TTTGATGCCA ATGTGTATAA CAACACAGTG
CGGATGCAAC ATGAACAACG AGTACAATAT TTAGCGCAAG CATATAATAT TCCGCTTGAA
AATTGTCATG TTGAAGAAGG TTTGCCGGAA GATGTGATTC CAGAAATGGC GGCGAAATTA
GATGCCGAAC TAGTGGTACT GGGTACAGTT GGTCGCACTG GTTTTTCAGC TGCATTAATT
GGTAATACTG CTGAACATGT CATCGACAGC ATTAATTGTG ATTTGTTAGC GATTAAACCT
GATGGCTATA AATCACCTTT AGAAGATTAG
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| Protein sequence | MKDYKKILVV INPTTDHQPA LARAVELASK SQAEITAFLS IFDFSYEMTS ILSSQEREAM
RQGVIDQRVA WLENAIDGFS KLNIKINTEV VWHNRPFESV INHAMKGNYD LIVKSTHVHD
KLKAVIFTPT DWHLMRKSPV PVLLVKEHDW PVAGKIICAV NVVTEDEDHQ TLNGKIINHA
LDLAKKFSAS VHLVNGYPGT PVNLAIELPD FDANVYNNTV RMQHEQRVQY LAQAYNIPLE
NCHVEEGLPE DVIPEMAAKL DAELVVLGTV GRTGFSAALI GNTAEHVIDS INCDLLAIKP
DGYKSPLED
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