Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2013 |
Symbol | |
ID | 4278925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2385663 |
End bp | 2386637 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134800 |
Product | cytochrome c oxidase, cbb3-type, subunit III |
Protein accession | YP_750697 |
Protein GI | 114563184 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00187341 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATGA GTAACTTCTG GAGCATTTGG ATTTCTGTAC TGACGATTGT GGTCATTGCT GGTTGTTTTA TCCTTCTAAA ACTGGTTAAT AATAATTACA CCGGTGTTGA AGAAGGTAAA TCAATGGGCC ACAGTTTTGA TGGTATTGAA GAACTGAACA ACCCACTACC AAAGTGGTGG GCGTACATGT TCTATTTAAC CATCGTATTC GGTGTGATCT ATTTAGCTCT ATATCCAGGC CTAGGTAACT ACAAAGGTCT GTTTGGTTGG ACAAGTTCGA ACCAAAGTAT TGGTACTGAA AAAGGCATTA AAGCCGACTC AGCTGCAGCG CTTGAAGCAG CAAAAGCTGA CAACCGTTTA TCTCAATATG ACCGCGAAGT GGCCCATGCT GACGAAAAAT ACGGTCCAAT TTTTGCGGCA TATTTAGCGA CACCGTTAGA AGAGCTAGTA AAAGACCCTG AAGCATTAAA AGTGGGCGGT CGTTTGTTTT TACAAAACTG TTCACAATGT CATGGTTCTG ATGCTCGTGG CTCTAAGGGC TTCCCTAACC TTACCGACAG TGATTGGTTA TATGGCGGCG AACTAGCCAC TATTAAAACC ACTATCATGA ACGGTCGCAA CGGCATGATG CCGCCAAAAG GTGGTTTACC TATCGAAGAC AGCGAAATTA AAGGTCTTGC TGAATACGTA GTTAAACTTT CTGGTGGTGA ACATGACGAA GCGTTAGCCG CTCAAGGTCA AGGTTCATTT ATGAAAGGTT GTTTTGCGTG TCATGGTATG GATGCAAAAG GCAACAAATT CATGGGTTCG CCTAACCTAA CTGATAACGT ATGGTTGTAT GGCGGTAGCC GTGGTGTGAT TGCAGAATCT ATCACTAATG GCCGCGCAGG CGTTATGCCA GCATGGAAAG ACATTCTTGG TGAAGAGAAA GTCCATGTCG TAGCAGCTTA TGTTTATAGC TTATCAAACA AATAG
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Protein sequence | MIMSNFWSIW ISVLTIVVIA GCFILLKLVN NNYTGVEEGK SMGHSFDGIE ELNNPLPKWW AYMFYLTIVF GVIYLALYPG LGNYKGLFGW TSSNQSIGTE KGIKADSAAA LEAAKADNRL SQYDREVAHA DEKYGPIFAA YLATPLEELV KDPEALKVGG RLFLQNCSQC HGSDARGSKG FPNLTDSDWL YGGELATIKT TIMNGRNGMM PPKGGLPIED SEIKGLAEYV VKLSGGEHDE ALAAQGQGSF MKGCFACHGM DAKGNKFMGS PNLTDNVWLY GGSRGVIAES ITNGRAGVMP AWKDILGEEK VHVVAAYVYS LSNK
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