Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2010 |
Symbol | |
ID | 4278922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2383411 |
End bp | 2384838 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134797 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_750694 |
Protein GI | 114563181 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000523358 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACC ATTCCCAGTC TACAGGCGCT GATTACAACT ACACTATTGT CCGCCAATTC GCACTAACCA CAGTTTTGTG GGGAATCGTT GGTATGTCAG TGGGTGTATT GATTGCGGCT CAGTTAATCT GGCCACAACT GAACTTCGAC ACTCCTTGGT TAACGTATAG TCGTTTACGA CCATTACACA CCAATGCGGT GATATTCGCG TTCGGAACAT CAGCTCTTTT CGCTACATCC TACTATGTTG TGCAACGCAC TTGTCAAATC CGTCTCTTTG CGCCCAAATT GGCCGCATTT ACGTTCTGGG GTTGGCAAGC CGTTATTATT GCAGCTGCTA TCACTTTACC AATGGGCTTT ACCCAAGGCA AAGAATATGC AGAACTAGAA TGGCCTATCG ATATCGCGAT TGCGATTATT TGGGTTAGCT ATGCAATTGT ATTCTTTGGC ACAATCGCTA AACGAACGAC ATCCCACATT TATGTGGCAA ACTGGTTCTT TGGTGCCTTT ATCATTACTG TTGCAGTACT TCACATTGTT AACTCAATGG CAGTACCAGT AAGCTTATTT AAGTCTTACT CTCTGTACTC CGGTGCAGTC GATGCGATGG TTCAGTGGTG GTACGGTCAT AATGCGGTAG GCTTCTTACT TACTGCTGGT TTCTTGGGGA TGATGTATTA CTTCGTGCCT AAGCAAGCTG GTCGTCCAGT GTATTCATAC CGTTTATCAA TTGTCCATTT TTGGGCGTTG ATTGCGTTAT ACATTTGGGC TGGTCCTCAC CACTTACATT ACACTGCCCT TCCTGACTGG ACTCAGTCAT TAGGCATGGT AATGTCATTA ATTCTATTCG CACCATCTTG GGGCGGTATG ATTAACGGTA TTATGACCTT GTCTGGTGCG TGGCATAAGC TGCGTACGGA CCCTGTATTA CGTTTCTTAG TTGTTTCATT GTCTTTCTAC GGTATGTCTA CCTTCGAAGG CCCAATGATG GCAATCAAAA CAGTTAATGC TTTATCTCAT TATACTGACT GGACTATTGG TCACGTTCAC TCTGGCGCGC TAGGCTGGGT TGCAATGGTG TCTATTGGTT CTTTATATCA CTTAATTCCA GTGCTATTTG GTCATGGTCG TATGTACAGC ATGAAGCTGG TTAACGTCCA TTTCTGGTTA GCGACTATCG GTACTGTTTT ATATATCGTG AGTATGTGGA TTTCTGGTGT TATGCAAGGT CTTATGTGGC GTGCGGTTAA CTCTGATGGA ACACTAACGT ATAGTTTCGT TGAGAGTTTA GAAGCCTCGT ACCCATTCTA CTTTGTACGC TTTATTGGTG GTTGTTTCTT CTTAACCGGT ATGTTTATTA TGGCCTATAA CGTTATCCGT ACCGTTAAAG CGTCTAAAGA TTCATTACCT GCTATTGCAG AAGCTTAA
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Protein sequence | MMNHSQSTGA DYNYTIVRQF ALTTVLWGIV GMSVGVLIAA QLIWPQLNFD TPWLTYSRLR PLHTNAVIFA FGTSALFATS YYVVQRTCQI RLFAPKLAAF TFWGWQAVII AAAITLPMGF TQGKEYAELE WPIDIAIAII WVSYAIVFFG TIAKRTTSHI YVANWFFGAF IITVAVLHIV NSMAVPVSLF KSYSLYSGAV DAMVQWWYGH NAVGFLLTAG FLGMMYYFVP KQAGRPVYSY RLSIVHFWAL IALYIWAGPH HLHYTALPDW TQSLGMVMSL ILFAPSWGGM INGIMTLSGA WHKLRTDPVL RFLVVSLSFY GMSTFEGPMM AIKTVNALSH YTDWTIGHVH SGALGWVAMV SIGSLYHLIP VLFGHGRMYS MKLVNVHFWL ATIGTVLYIV SMWISGVMQG LMWRAVNSDG TLTYSFVESL EASYPFYFVR FIGGCFFLTG MFIMAYNVIR TVKASKDSLP AIAEA
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