Gene Sfri_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2003 
Symbol 
ID4278915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2377096 
End bp2377509 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content40% 
IMG OID638134790 
ProductGreA/GreB family elongation factor 
Protein accessionYP_750687 
Protein GI114563174 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.108948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACA GACCTGAAAT AACGATCTCA TCACTTGATG CACAGAGATT ATTTACGCTA 
ATCGAGTCCT TACCTACAAA GAAAATGGTA GGTATAAGTG AGCTTGAAGA AGAACTCGCT
CGAGCCATTA TCGTAGATCC AAAAGAAATA CCCACTACGA TTGTTACCAT GAATTCAACG
GTTAAATTTA CTGTCGAGGC GTCTCGAGAA GAGTTTTTAA TGACGCTTGT TTATCCCAAA
GATCTCGATT TGAAAGGCGA TAAAATTTCT ATTCTAGCGC CGGTTGGGAG TGCCTTACTT
GGGTTGGCTC AAGGAGATCA AATTGAATGG CCAAAGCCTG GTGGGGGGTT AATAAAAATA
ACCATTAATG AAATTTTTTA TCAACCAGAA AGGGCTGGTG AATACCATCG TTGA
 
Protein sequence
MNNRPEITIS SLDAQRLFTL IESLPTKKMV GISELEEELA RAIIVDPKEI PTTIVTMNST 
VKFTVEASRE EFLMTLVYPK DLDLKGDKIS ILAPVGSALL GLAQGDQIEW PKPGGGLIKI
TINEIFYQPE RAGEYHR