| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1995 |
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| Symbol | |
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| ID | 4278907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2366825 |
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| End bp | 2368003 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134782 |
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| Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
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| Protein accession | YP_750679 |
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| Protein GI | 114563166 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.783137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGGT TTATTAATAC CTGGCGGAGG CTAAACCAGC CTGCCAAATA TCTTACATTA
GGCACAATTA GCCTATCTGC TTTTTTAATG GGGATTATAT TCTGGGGTGG TTTTAATACC
GCACTGGAAA TGACCAACAC TGAAGAGTTC TGTATTAGCT GTCACAGTAT GGAAAGCAAG
CCCTACCAAG AGCTACAGCA AACGGTTCAT TGGTCTAATC ACTCTGGCGT TCGGGCCACT
TGCCCCGATT GTCACGTGCC TCATAACTGG AGTCGTAAAA TTGGGCGCAA GATTGAAGCA
TCACATGATA TGTGGGGTTG GTTGATGCAA ACTGTTAATA CTGAAGAAAA ATTTGAATCA
AAACGTCTAG AGATGGCTAG CCGTGAGTGG AAACGCTTCG ACCGTGATAA CTCTTTGGCG
TGTAAAAACT GCCATAACTA TGACTCGATG AAATGGGATG ACATGTCAAA GTTGGCGCAA
AAACAAATGA AGCGTGCAGC AGAGATAGAC CAGAGCTGTG TTGATTGCCA TAAAGGTATT
GCTCACAAAC TTCCTGACAT GGGGACTTCT CGTGCACCAG AACTCATTGC ACAAGTAGGA
TCTGGCGAAA CTGGTCTTGT GGTTGGTGCT CAGTACTTTA CTGCCTTGAC TAAACCCCTT
TATTTTAATC AAAAAACAGA TGTTGAAGCT GGCACGTTAA ACATTGCCAC TAAAGTGACG
GTACTTGAAA TCAATGGCAG TCGTGTACTA GTTGGGATTA ATGGTTGGCG TAAAAAAATT
GGTGCTGGTC GTGTTATCTA TTTCGATTTT GGTCTTAACA TTCTGTCAGC TCAGTTATCA
AAAGATGCTG CGTTAGAAGA AGGCGTAATG AATGTTTTTG AACAGAAAGA AGACCCTATG
ACCGGATTAA CATGGCAGCG TGTTGAAGCC AAAATTTGGA CAGATGCTGA CTACCTAATT
AACGATTTAC AGCCACTTTG GGATTATGCC CGCACCACTT ATACCAGAAG TTGTAGTGTG
TGCCATACCC AACCAGCAGA AGCACACTTT GACGCTAACA GCTGGCCTGG AATGTTTAAA
GGCATGATTG CATTCGTCAA CATGGACCAA GACACTCAAG CGCTTGTACA AAAGTACTTA
CAAGAGCATT CATCTACTTT CGATAAGTCG GCGCATTAA
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| Protein sequence | MKWFINTWRR LNQPAKYLTL GTISLSAFLM GIIFWGGFNT ALEMTNTEEF CISCHSMESK
PYQELQQTVH WSNHSGVRAT CPDCHVPHNW SRKIGRKIEA SHDMWGWLMQ TVNTEEKFES
KRLEMASREW KRFDRDNSLA CKNCHNYDSM KWDDMSKLAQ KQMKRAAEID QSCVDCHKGI
AHKLPDMGTS RAPELIAQVG SGETGLVVGA QYFTALTKPL YFNQKTDVEA GTLNIATKVT
VLEINGSRVL VGINGWRKKI GAGRVIYFDF GLNILSAQLS KDAALEEGVM NVFEQKEDPM
TGLTWQRVEA KIWTDADYLI NDLQPLWDYA RTTYTRSCSV CHTQPAEAHF DANSWPGMFK
GMIAFVNMDQ DTQALVQKYL QEHSSTFDKS AH
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