Gene Sfri_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1985 
Symbol 
ID4278897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2351695 
End bp2353263 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content43% 
IMG OID638134772 
Producthypothetical protein 
Protein accessionYP_750669 
Protein GI114563156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAC AAGATAACAT TGAGAAAATT GTCACCCACC CTCACCTTTC TCCAAAGCAA 
AAATCGAATT ATTTAGCATT AGAAGCTGAA AACAGTCTGC CTTATGTGGC GGTGTCTGAA
CGGATAAATA ATGCCATGAA ACAAGGTATT ATCTGCGATA TGTTTGAAGG TCATGCGCCA
TTTAAACCGC GTTATGTGTT GCCAGATTAT GCCAAATACC TGCAGCAAGG ATCTGAGTAT
TTGGAGCTGT CGCCCGCCGA AGACTTTGAT GACGCCTTAA ATGCATTAAC CATTCTTTAT
TTTCATGTGC CATCGGTGAC GAATATCCCA GTTTACTTAG GCCAATTAGA TACGTTATTA
ATGCCTTTTA CACAGGGGCT TGATGCTGAA GCCATCTATC GTAAGCTCAA GCGGTTTTGG
ATATTACTCG ACCGCACGTT ACCCGATGCG TTTATGCATG TGAATATTGG CCCAACTGAT
AACATTATTT GCCGAACCAT TTTGCGTATA GATGCAGAAT TACAACAAAT TGCCCCCAAT
CTAACCTTCA TGTATGACCC TGCCGTAACG CCAGATGATT TATTATTTCA GGCCACCAGC
AATATTTGTC AATGCGGTAA ACCTCATATT GCCAACTATC CGCTACATGC CGACGCCTTC
GATGCTCGTG GTTTTGGGAT TGTCAGTTGT TATAACGCAT TACCGTTAGC TGGCGGAGCC
AATACCTTGG TGCGCGTTAA CCTCAAAGAA GTCGCTCTAA ACGCTAACAG TATTGATGAT
TTTTTTGCCC AAACGCTGCC ATATTACAGC CAACTCACAT TCGAGCTTAT TGAAGCTCGT
TCGGCATTTT TACACCAACA ATCTCATTTC TTTGACAGTT TTTTAGTTAA GGAACAGTTG
ATCGATGAAT CTCGCTTTGC ACCTATGTTC GGTATTTATG GTATGGCTGA AGCGGTCAAT
ATTTTACAAG CCTTACTACC TAATGCTGCT GAGATTACAA CTGCTAATGT CGCAAGCAAA
CCCAATACAG GTTACGGCTA TAACCCAGAT GCAAATGAAC TTGGGCTCAG AATATCTGCA
GCTTTAGACA ACATAGTAAA GTCGACCCCG GTCACTTACG GTTATAACGG TCGCGCGTTA
TTGCATTCTC AAAGTGGCAT TAGTTTGGAT AAAAATGTCA CCCCTGGCGT GCGTATTCCC
TATGGCTCAG AACCAGACCC CATTAGTCAT ATTCAAGCAC TAGCTAAACA TCATCAATAT
TATACTGCCG GAATCAGCGA TATTCTAACC ATAGATGAAA CCGTTAAAGC TAATCCTCAA
GCGATGTTCC AACTCTGTAA AGGCGCCCTT AGTTCAGGTT TTAGAGAGTT TAGTGCCAAC
GTTGCTAATA ACGATTTAGT CCGTGTTACT GGTTATATGG TTAAACGCTC GGACATTGAA
ACTTTTAAGC AATGCGGTTC ACGCACCAAC ACCACAGGGT TAGCTGCTGA AGCCGCAATC
AATACGGGAA TATTTCAACG CCAAGCTCGG GTAATTGCTC ACGAACAGGC TCCTTTTATT
CATGAGTAA
 
Protein sequence
MTLQDNIEKI VTHPHLSPKQ KSNYLALEAE NSLPYVAVSE RINNAMKQGI ICDMFEGHAP 
FKPRYVLPDY AKYLQQGSEY LELSPAEDFD DALNALTILY FHVPSVTNIP VYLGQLDTLL
MPFTQGLDAE AIYRKLKRFW ILLDRTLPDA FMHVNIGPTD NIICRTILRI DAELQQIAPN
LTFMYDPAVT PDDLLFQATS NICQCGKPHI ANYPLHADAF DARGFGIVSC YNALPLAGGA
NTLVRVNLKE VALNANSIDD FFAQTLPYYS QLTFELIEAR SAFLHQQSHF FDSFLVKEQL
IDESRFAPMF GIYGMAEAVN ILQALLPNAA EITTANVASK PNTGYGYNPD ANELGLRISA
ALDNIVKSTP VTYGYNGRAL LHSQSGISLD KNVTPGVRIP YGSEPDPISH IQALAKHHQY
YTAGISDILT IDETVKANPQ AMFQLCKGAL SSGFREFSAN VANNDLVRVT GYMVKRSDIE
TFKQCGSRTN TTGLAAEAAI NTGIFQRQAR VIAHEQAPFI HE