Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1985 |
Symbol | |
ID | 4278897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2351695 |
End bp | 2353263 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134772 |
Product | hypothetical protein |
Protein accession | YP_750669 |
Protein GI | 114563156 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATTAC AAGATAACAT TGAGAAAATT GTCACCCACC CTCACCTTTC TCCAAAGCAA AAATCGAATT ATTTAGCATT AGAAGCTGAA AACAGTCTGC CTTATGTGGC GGTGTCTGAA CGGATAAATA ATGCCATGAA ACAAGGTATT ATCTGCGATA TGTTTGAAGG TCATGCGCCA TTTAAACCGC GTTATGTGTT GCCAGATTAT GCCAAATACC TGCAGCAAGG ATCTGAGTAT TTGGAGCTGT CGCCCGCCGA AGACTTTGAT GACGCCTTAA ATGCATTAAC CATTCTTTAT TTTCATGTGC CATCGGTGAC GAATATCCCA GTTTACTTAG GCCAATTAGA TACGTTATTA ATGCCTTTTA CACAGGGGCT TGATGCTGAA GCCATCTATC GTAAGCTCAA GCGGTTTTGG ATATTACTCG ACCGCACGTT ACCCGATGCG TTTATGCATG TGAATATTGG CCCAACTGAT AACATTATTT GCCGAACCAT TTTGCGTATA GATGCAGAAT TACAACAAAT TGCCCCCAAT CTAACCTTCA TGTATGACCC TGCCGTAACG CCAGATGATT TATTATTTCA GGCCACCAGC AATATTTGTC AATGCGGTAA ACCTCATATT GCCAACTATC CGCTACATGC CGACGCCTTC GATGCTCGTG GTTTTGGGAT TGTCAGTTGT TATAACGCAT TACCGTTAGC TGGCGGAGCC AATACCTTGG TGCGCGTTAA CCTCAAAGAA GTCGCTCTAA ACGCTAACAG TATTGATGAT TTTTTTGCCC AAACGCTGCC ATATTACAGC CAACTCACAT TCGAGCTTAT TGAAGCTCGT TCGGCATTTT TACACCAACA ATCTCATTTC TTTGACAGTT TTTTAGTTAA GGAACAGTTG ATCGATGAAT CTCGCTTTGC ACCTATGTTC GGTATTTATG GTATGGCTGA AGCGGTCAAT ATTTTACAAG CCTTACTACC TAATGCTGCT GAGATTACAA CTGCTAATGT CGCAAGCAAA CCCAATACAG GTTACGGCTA TAACCCAGAT GCAAATGAAC TTGGGCTCAG AATATCTGCA GCTTTAGACA ACATAGTAAA GTCGACCCCG GTCACTTACG GTTATAACGG TCGCGCGTTA TTGCATTCTC AAAGTGGCAT TAGTTTGGAT AAAAATGTCA CCCCTGGCGT GCGTATTCCC TATGGCTCAG AACCAGACCC CATTAGTCAT ATTCAAGCAC TAGCTAAACA TCATCAATAT TATACTGCCG GAATCAGCGA TATTCTAACC ATAGATGAAA CCGTTAAAGC TAATCCTCAA GCGATGTTCC AACTCTGTAA AGGCGCCCTT AGTTCAGGTT TTAGAGAGTT TAGTGCCAAC GTTGCTAATA ACGATTTAGT CCGTGTTACT GGTTATATGG TTAAACGCTC GGACATTGAA ACTTTTAAGC AATGCGGTTC ACGCACCAAC ACCACAGGGT TAGCTGCTGA AGCCGCAATC AATACGGGAA TATTTCAACG CCAAGCTCGG GTAATTGCTC ACGAACAGGC TCCTTTTATT CATGAGTAA
|
Protein sequence | MTLQDNIEKI VTHPHLSPKQ KSNYLALEAE NSLPYVAVSE RINNAMKQGI ICDMFEGHAP FKPRYVLPDY AKYLQQGSEY LELSPAEDFD DALNALTILY FHVPSVTNIP VYLGQLDTLL MPFTQGLDAE AIYRKLKRFW ILLDRTLPDA FMHVNIGPTD NIICRTILRI DAELQQIAPN LTFMYDPAVT PDDLLFQATS NICQCGKPHI ANYPLHADAF DARGFGIVSC YNALPLAGGA NTLVRVNLKE VALNANSIDD FFAQTLPYYS QLTFELIEAR SAFLHQQSHF FDSFLVKEQL IDESRFAPMF GIYGMAEAVN ILQALLPNAA EITTANVASK PNTGYGYNPD ANELGLRISA ALDNIVKSTP VTYGYNGRAL LHSQSGISLD KNVTPGVRIP YGSEPDPISH IQALAKHHQY YTAGISDILT IDETVKANPQ AMFQLCKGAL SSGFREFSAN VANNDLVRVT GYMVKRSDIE TFKQCGSRTN TTGLAAEAAI NTGIFQRQAR VIAHEQAPFI HE
|
| |