| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1983 |
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| Symbol | |
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| ID | 4278895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2349635 |
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| End bp | 2350555 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134770 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_750667 |
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| Protein GI | 114563154 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGG CCAAGCTTTC ACGTATCAGT ATGAAACACT TGATCACTTT GCATGTGATG
CTTGAAACCC TCAGTGTCAC AGCCTGTGCT GAACGGTTAT GTCTAAGCCC ATCGTCGGTG
AGTAAAACCT TAAGTCAGCT AAGAGAAAGT TTGCATGATG AATTATTCTA TCGTCATGGC
AATTCACTCA TCGCCACTGC ATTAGCACGA CGACTAGGCC CAAGTGTTAA GCAGATGATT
AATGATATGA ATCAGATCAT GAACCAGGAT GTATTCAAGC CACAACATTA TCAAGGTAGC
TTTTCGCTGG CGATGCGCGA AAGCACATTT GAGTTATTAG CCGCCACATT AACGGCTCAT
ATTCTCAACT TAGCGCCCAA TATCCATATC GATATTTACA ATAAAGACAA CATCGGCTTT
GACGGCTTAG TAAAGGGTTC GTTGGATTTT ATTCTTTTGC CACATGACTT AAGCCAACCA
ACCAATATCG ATGAAGACTT AGTCTGGGAA ACCTTAATCA ACGATGAAAT GGTCTGCCTA
ATGAGTGCTA GCCATCCATT GGCTTCACAG CAGACTATTA GCCTTGATGA CTACTTAAAT
TTCAGCCATA TCGGCATAAC AGATACTGAT TTGAGCACAC CATTTTTTGA TATTTTACTG
GCACAGCAAT CAAAAAAACG GGCGATACCG ATTTCGGTAC CTGACTTTGG CAGCGCAGCG
TTAATGTGCC ATCACAGTGA ACTGCTATTT ACCTGTTCGC GCCACTGGGC CTCAATAGCC
AAGCAAGCCC AAGGATTACT GATCAAACCG TTACCGATCG ATTATGGCAA AGTTGCTTAT
AGCCTTGTGT GGCATCGGCA AAGTATGAAC GATCCTGCTC ATCGCTGGCT GTATGAACAA
ATATTGCTTT GTAGTCGCTA A
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| Protein sequence | MELAKLSRIS MKHLITLHVM LETLSVTACA ERLCLSPSSV SKTLSQLRES LHDELFYRHG
NSLIATALAR RLGPSVKQMI NDMNQIMNQD VFKPQHYQGS FSLAMRESTF ELLAATLTAH
ILNLAPNIHI DIYNKDNIGF DGLVKGSLDF ILLPHDLSQP TNIDEDLVWE TLINDEMVCL
MSASHPLASQ QTISLDDYLN FSHIGITDTD LSTPFFDILL AQQSKKRAIP ISVPDFGSAA
LMCHHSELLF TCSRHWASIA KQAQGLLIKP LPIDYGKVAY SLVWHRQSMN DPAHRWLYEQ
ILLCSR
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