| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1978 |
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| Symbol | |
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| ID | 4278890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2345391 |
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| End bp | 2346257 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134765 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_750662 |
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| Protein GI | 114563149 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGAA TCCGTATCGA TCCTTTTTAT CATCAAGCTA GCCATACGAT TACGTACGTG
GTGACAGATA TTGCTACGCG TCAATGTGCG ATTATTGATC CTGTTTTAGA TTTTGACATG
GCGTCTGGCA CCATAAGCAC GAGTTTTGCT GATAGCATCA TTGAGCATAT CGATGAACAT
GGATTTGAAG TTGAATGGAT TTTAGAAACC CATACCCACA GCGACCATAT TTCTGCGGCC
TGTTATATCA AGAAAAAACG CGGAGGGATG ACCGGAATTG GCGAGCACAT CACCAAAGTT
CAGCATACCT TTAAGCGATT ACTGAATCTT GATGATAGTT TTAAATGTAA TGGCGAGCAA
TTTGAACAAT TATTTGTGGA TGAAGAACTC ATTAAACTGG GGCATTTAGA TATTCACATT
ATGCATACAC CGGGTCATAC ACCAACCTGC GTGAGTTATC TTATTGAAGA TGCTGTGTTT
GTAGGCGACA CTTTGTCTAC GCCGGAGTTA GGCACCGTTA ATGCTGATTT CCCTAATAGC
AGCGCAATAA CCTTGTACCA TTCAATACAA CGAATATTGG CATTACCAAA TTGCACTAGG
GTATTTGTTG GCCATGATCC ACATGCACAA AAACGTGCAG ATAATGGGTT AGAAACATCG
GTGATTGCGC AAAAACGCTA TAACAGTGTG GTAGGGGGGA AAGTCACTCT AGCAGAGTTT
ATTAAACGGC ATCAACAACG CCATATTGGC TCTGAGATAC AACAACTATT ATTAGCCGCT
ATTCAAATTA ATATTCGTGC GGGTAATATG CCAATAGCTG AAGGTAGGGA TAACTACTAT
CTTAAAATCC CGCTTAACCA ACTCTAA
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| Protein sequence | MSRIRIDPFY HQASHTITYV VTDIATRQCA IIDPVLDFDM ASGTISTSFA DSIIEHIDEH
GFEVEWILET HTHSDHISAA CYIKKKRGGM TGIGEHITKV QHTFKRLLNL DDSFKCNGEQ
FEQLFVDEEL IKLGHLDIHI MHTPGHTPTC VSYLIEDAVF VGDTLSTPEL GTVNADFPNS
SAITLYHSIQ RILALPNCTR VFVGHDPHAQ KRADNGLETS VIAQKRYNSV VGGKVTLAEF
IKRHQQRHIG SEIQQLLLAA IQINIRAGNM PIAEGRDNYY LKIPLNQL
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