| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1976 |
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| Symbol | |
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| ID | 4278888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2342841 |
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| End bp | 2344157 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134763 |
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| Product | sigma54 specific transcriptional regulator, Fis family protein |
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| Protein accession | YP_750660 |
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| Protein GI | 114563147 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA CCACCGTTGT ACAATCTATG ATAAACGCCA TTGATAAACC GGCGATTTTT
ATTACTCCCG ATTATGTGAT CCATGCGGTT AACCAAGCCT ATAGAGAAAC CTATGATGCC
GACGTTATTT TAGGCCAAAG TAAATGCCAT CAAATCTCTC ATCACAGTGA CCAACCTTGC
GATAAACACG GTGAGGAATG CCCGTTATTA CAATGCCAGA GTACTAACCG AGCTGCCAGT
GCAGTGCATA TTCACAGCAC AGTGCAAGGT AAGTCTTACT GCGACATTTT AATGAAACCC
ATAAAAGATA ACAGTGGCAT GGTATTGGGG TTTCTAGAGA TTTTAGATGC TATAGATTAC
GCATCGACGG AATCAAAAAA AGGCACTATG GTCGGTCAGT CAGCGCCATT TAAACAGATG
CTCAACAGGA TTAATCGAGC ATCTCAATCC AATATAGCGG TACTGTTACA AGGTGAAACT
GGTTCAGGTA AAGAGTTAGT CGCTAAAGCG GTACATCAGG CCAGCAACCG AAATGATAAA
CCGTTTGTGG TGATTGAATG TACTGGGCTG AGTGAAAACC TGTTCGAAAG TGAGCTGTTC
GGTTATGAAA AAGGTGCATT TACAGGGGCG ACAAGCAGTA AAAAAGGCTT GATTGAAATA
GCGCACGGTG GAACGGTATT TTTTGATGAA ATTGGCGATG TACCGATGAA CATGCAAGTG
AAGTTACTCA GGTTACTTGA AACCCAGTGT TATCGTGCCG TCGGCGGATT AAAACAGAAA
CGTTCTGACT TTAGGCTAGT CAGTGCCAGC CATAAGAATT TACTCGATTT AGTAGAAAAA
GGTGAATTTA GGCGCGACCT GTATTACCGC ATTGCAGGAT TTCCAATCTA CTTACCGTCG
TTACGTGAGC GCTATGATGA CATTCCAACG CTGGTGAATC ACTTTATAAA ATATTCTGAT
TACAAACATA AAAAGTTTTC GAGCAATGCA TTAACTCTTT TGGGTCGTTA TGCATTTCCG
GGGAATATTC GCGAATTGAA AAATATTATT GAGCAATCGG CACTTATCGC CAATGAGGAT
GTTATACACA GCAGTGATTT GCCTGAAAGC GTTCAACTTA GTCGCACATC TACGGATGAA
ACAATTGCTG TAAAACTTAA CACCGAACTG ATGACGTTAG ATGACATGGA ATGTGCGTAC
CTTTCGCAGG TATGTGAGCA ATATGCAGGA TCGCCAGCCG AACTAGCGAT AACGCTTAAT
ATCAGTGTGC GTACCTTATA TCGAAAATTA CAACGCTATG GTTTAAAGCT TAGCTAG
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| Protein sequence | MNNTTVVQSM INAIDKPAIF ITPDYVIHAV NQAYRETYDA DVILGQSKCH QISHHSDQPC
DKHGEECPLL QCQSTNRAAS AVHIHSTVQG KSYCDILMKP IKDNSGMVLG FLEILDAIDY
ASTESKKGTM VGQSAPFKQM LNRINRASQS NIAVLLQGET GSGKELVAKA VHQASNRNDK
PFVVIECTGL SENLFESELF GYEKGAFTGA TSSKKGLIEI AHGGTVFFDE IGDVPMNMQV
KLLRLLETQC YRAVGGLKQK RSDFRLVSAS HKNLLDLVEK GEFRRDLYYR IAGFPIYLPS
LRERYDDIPT LVNHFIKYSD YKHKKFSSNA LTLLGRYAFP GNIRELKNII EQSALIANED
VIHSSDLPES VQLSRTSTDE TIAVKLNTEL MTLDDMECAY LSQVCEQYAG SPAELAITLN
ISVRTLYRKL QRYGLKLS
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