| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1969 |
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| Symbol | |
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| ID | 4278881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2336965 |
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| End bp | 2338938 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134756 |
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| Product | copper-resistance protein, CopA family protein |
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| Protein accession | YP_750653 |
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| Protein GI | 114563140 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGC AATACATGAT AAAACCCATG ATTCAAACGA CAAACAGTGA ACTCAACAAC
AGCCGACGCC GTTTTGTGTT TGGTGCATCC GCCATGTTGG CATTGATGTC GATCCCTTTC
CCTAAAAATG CCTTTGCCAA TGCGTTAAGC CAATCGTTGA GCCAGCTTTC TGGCAAAGTG
TTCGACTTAT CAATTGACTA TAAAATGGTT AATTTTACCG GGAAATCTGC TCGAGCTACT
GTGGTAAACC AATTACTGCC CGCGCCGTTA TTACGTTGGA AAGAAGGTGA AACAGTCACC
TTAAGAGTAA AAAATAATCT CGACCATGAT AGTTCTATTC ACTGGCACGG TATTATTTTA
CCCACCGAAA TGGACGGTGT GCCTGGCTTT AGCTTTGATG GCATTAAACC CGGTGAAACA
TTTGAGTATC AATTTACCGT CCAGCAAAGT GGCACATATT GGTATCACAG TCATTCAGGC
TATCAAGAAC AAACCGGTTT ATTCGGCGCT ATTGTGATTG ATCCAGCGAC CCCCGATCCG
GTCATATATG ACCGTGACTA TGTGATCATG CTGTCTGATT GGTCTGACGA AGCCCCTGAA
AACATTTATG CCAAATTAAA GAAGCAAGCC GACTACTATA ATTACCGTGA GCGTACGGTA
ATGGATTTTT TCTCTGACGT GAATAAAAAT GGCTTAACCA ATACGTGGAA CGCTCGTTCG
ATGTGGAATA ACGCACGCAT GAGTGACAGC GACATTTCTG ATGTGACCGG CTCAACTTAC
ACTTATTTAA TGAATGGCAA TCCACCGCAA CAGGGCTGGC AAGGGTTGTT TAAACAAGAT
GAGAAGGTGC GCTTACGCTT TATAAATAGT TCTGCGATGA CCATATTTGA TGTGCGTATA
CCGGGTCTCA AAATGACTGT TGTTGCCAGT GATGGTCAGA ACATTCAACC GGTTTCTGTG
GATGAATTTC GAATAGGTGT TGCTGAAACC TATGATGTGG TTATTGAGCC AGAGGTTGAT
AATGCCTATT GCATTTTTGC TCAGAGTATC GACCGCACCG GCTTTACGGT AGGTAACCTT
ACCTCAGATG CCAGTTTACA TGCTCCTATT CCCCCAATGG ATCCAAGGCC CGTCCTTGGC
CACAGTGATA TGGGCATGGA TATGAGTGGC GGTGATTTGC CAGGCATGGA TCATAGCAAG
ATGGCTATGG GCGGCGGTGA TATGTCAGGC ATGGACCACA GCAAGATGGC TATGGGTGGC
GGTGATATGT CAGGCATGGA TCACAGCAAG ATGGCTATGG GCGGCGGTGA TATGTCAGGC
ATGGACCACA GCAAGATGGC TATGGTCGGC GGTGATATGT CAGGCATGGA TCACAGCAAA
ATGAACATGG ACGCTGCTAA AGCGACAGTC TCAGGACTAG GGCTTGCAGG CTTTGGCAGT
AACTATGAAA TTAAACACAT TGATACCGAG TTCGGCCCAC AAGTGGATAT GCGTGCCGAT
GCCCCAAAAA GTGGTTTACA CGATCCAGGG ATTGGATTGC GTGACCATCA ACAACAATTT
AACCGCAAAG TATTAACTTA TGGCGATATT AAAGGCTTAC ATCCTACCTA CGACACGCGC
CAACCTAGCC GCGAAATTCA ACTGCATTTA ACCGGCAATA TGAACCGATA TATGTGGTCT
GTGAATGGGG TGAAATTTAT GGACGCCGCG CCATTAGAGT TTGTATACGG AGAAAGACTG
CGGATCACCT TAGTGAACGA CACGATGATG ACTCACCCTA TGCATTTGCA TGGTATGTGG
AGTGAGTTAG AGACAGGCGA CCCTGATTTT ATTCCCCGTA AGCACACGGT ATTAGTTCAG
CCGGGTTCTA AGATCAGTTA CTTAGTCACC GCCGATGCAA AAGGGCAATG GGCATATCAT
TGCCACTTGT TATTCCACAT GCCAGGCATG TTCAGAAAAG TCGTGGTGAA ATAA
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| Protein sequence | MKSQYMIKPM IQTTNSELNN SRRRFVFGAS AMLALMSIPF PKNAFANALS QSLSQLSGKV
FDLSIDYKMV NFTGKSARAT VVNQLLPAPL LRWKEGETVT LRVKNNLDHD SSIHWHGIIL
PTEMDGVPGF SFDGIKPGET FEYQFTVQQS GTYWYHSHSG YQEQTGLFGA IVIDPATPDP
VIYDRDYVIM LSDWSDEAPE NIYAKLKKQA DYYNYRERTV MDFFSDVNKN GLTNTWNARS
MWNNARMSDS DISDVTGSTY TYLMNGNPPQ QGWQGLFKQD EKVRLRFINS SAMTIFDVRI
PGLKMTVVAS DGQNIQPVSV DEFRIGVAET YDVVIEPEVD NAYCIFAQSI DRTGFTVGNL
TSDASLHAPI PPMDPRPVLG HSDMGMDMSG GDLPGMDHSK MAMGGGDMSG MDHSKMAMGG
GDMSGMDHSK MAMGGGDMSG MDHSKMAMVG GDMSGMDHSK MNMDAAKATV SGLGLAGFGS
NYEIKHIDTE FGPQVDMRAD APKSGLHDPG IGLRDHQQQF NRKVLTYGDI KGLHPTYDTR
QPSREIQLHL TGNMNRYMWS VNGVKFMDAA PLEFVYGERL RITLVNDTMM THPMHLHGMW
SELETGDPDF IPRKHTVLVQ PGSKISYLVT ADAKGQWAYH CHLLFHMPGM FRKVVVK
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