Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1968 |
Symbol | |
ID | 4278880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2336453 |
End bp | 2336968 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134755 |
Product | hypothetical protein |
Protein accession | YP_750652 |
Protein GI | 114563139 |
COG category | [R] General function prediction only |
COG ID | [COG3019] Predicted metal-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTC TATATCGCAA TTCTATTCGT TTTTTTCGTG TCATAGGTAC TATTTTTATT CTGCAAATTA TGGGAGGGAT GTTACCTGCC CATGCAGCAG AGCCCGGCAC TACGGCGCCA TTACTCACTG TTTATAAAGA TGCCAATTGT GGCTGTTGTG AGAAATGGCT AACGCATATT CGTGAGCGTG GATTTAGTGT TAATGCCCAC AATATTAACA ACCTTTATGA GTTTAAACAG TCAAAGGGTA TTCCTGCTTC AATGCAATCT TGCCATACCG CAGTGTCATC TCAAGGTTAT GTGTTTGAAG GGCATATCCC TGCAAAATTC ATTAGTCGTT TTTTAGCCAC CCCCCCTAAA GATGCTATCG GCCTAACCGT ACCCGCTATG CCTGTGGGCA GCCCTGGTAT GGAGTACCAA GATAAATTTA TGCCATACCA AGTATTACTG TTGAAAAATG ATGGCAGTAG CCAGGTTTAC GCCCAAGTGA ACTCGCTTGA GGAGTCTGTG CAATGA
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Protein sequence | MSALYRNSIR FFRVIGTIFI LQIMGGMLPA HAAEPGTTAP LLTVYKDANC GCCEKWLTHI RERGFSVNAH NINNLYEFKQ SKGIPASMQS CHTAVSSQGY VFEGHIPAKF ISRFLATPPK DAIGLTVPAM PVGSPGMEYQ DKFMPYQVLL LKNDGSSQVY AQVNSLEESV Q
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