Gene Sfri_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1968 
Symbol 
ID4278880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2336453 
End bp2336968 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content44% 
IMG OID638134755 
Producthypothetical protein 
Protein accessionYP_750652 
Protein GI114563139 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTC TATATCGCAA TTCTATTCGT TTTTTTCGTG TCATAGGTAC TATTTTTATT 
CTGCAAATTA TGGGAGGGAT GTTACCTGCC CATGCAGCAG AGCCCGGCAC TACGGCGCCA
TTACTCACTG TTTATAAAGA TGCCAATTGT GGCTGTTGTG AGAAATGGCT AACGCATATT
CGTGAGCGTG GATTTAGTGT TAATGCCCAC AATATTAACA ACCTTTATGA GTTTAAACAG
TCAAAGGGTA TTCCTGCTTC AATGCAATCT TGCCATACCG CAGTGTCATC TCAAGGTTAT
GTGTTTGAAG GGCATATCCC TGCAAAATTC ATTAGTCGTT TTTTAGCCAC CCCCCCTAAA
GATGCTATCG GCCTAACCGT ACCCGCTATG CCTGTGGGCA GCCCTGGTAT GGAGTACCAA
GATAAATTTA TGCCATACCA AGTATTACTG TTGAAAAATG ATGGCAGTAG CCAGGTTTAC
GCCCAAGTGA ACTCGCTTGA GGAGTCTGTG CAATGA
 
Protein sequence
MSALYRNSIR FFRVIGTIFI LQIMGGMLPA HAAEPGTTAP LLTVYKDANC GCCEKWLTHI 
RERGFSVNAH NINNLYEFKQ SKGIPASMQS CHTAVSSQGY VFEGHIPAKF ISRFLATPPK
DAIGLTVPAM PVGSPGMEYQ DKFMPYQVLL LKNDGSSQVY AQVNSLEESV Q