| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1948 |
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| Symbol | |
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| ID | 4278860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2312841 |
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| End bp | 2313437 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134735 |
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| Product | transcriptional regulator BetI |
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| Protein accession | YP_750632 |
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| Protein GI | 114563119 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03384] transcriptional repressor BetI |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.200723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAGAC CTACAGTGAA AAACGTCAGA CAACAACAGC TAATAGATGC CACGTTAATG
TCAATCGAAC GTCATGGGTT ACAAAACACT ACTATTAATA CCATTAGTGG ATTGGCGGGA
ATGTCATCAG GGATCATCAG CCACTATTTT GGTGGTAAAC AAGGGTTAAT TGAAGCCACG
CAGAAATTTC TATTAGAGGA ATTGAAGCAA GCATTACTGA CAAGAACGTC AGGCAAAACA
TTAACCCCAA TAGATAGGCT TTCAATGATC GTGGAAGCAA ACTTTACCGA ATTACAACGT
TCAACAGCCG CGACAAAAAC ATGGTTAAGC TTCTGGTCCC AAGCGATGCA CGATCCGGGG
TTAGCAAGAT TACAAAACAT TAATAGTCAG CGGTTATACA GCAACCTGCT TTTTTCGTTT
AAACAATTAT TACCCAATGC AGCCGCTGTA AGTGCAGCCA AGCAAACAGC GGCAGTAATT
GATGGTTTTT GGTTACGCAG TGCGTTGAGT ACCACCCCAA TAGAAGATTT TAAACAAGCC
CAAATTTTAT CTAAAGCCTT TATCAAGGCT GTGATCGTGC ACAACGGAGT AGAATAA
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| Protein sequence | MPRPTVKNVR QQQLIDATLM SIERHGLQNT TINTISGLAG MSSGIISHYF GGKQGLIEAT
QKFLLEELKQ ALLTRTSGKT LTPIDRLSMI VEANFTELQR STAATKTWLS FWSQAMHDPG
LARLQNINSQ RLYSNLLFSF KQLLPNAAAV SAAKQTAAVI DGFWLRSALS TTPIEDFKQA
QILSKAFIKA VIVHNGVE
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