| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1947 |
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| Symbol | |
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| ID | 4278859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2311375 |
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| End bp | 2312841 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134734 |
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| Product | betaine aldehyde dehydrogenase |
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| Protein accession | YP_750631 |
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| Protein GI | 114563118 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.614027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATCGT TAGTTATTTA TCAAAATTAT ATTCATGGAA AATACCAATC AAACGGTACT
GGCGAAACAT TTGAAGTGAT CAATCCTGCT ACTGGAGATG TCAGCTATTT AGTTGAAGTA
GCCACCGAGT CTGTGCAAAA AGCCGCAATA GAGAGTGCCA AAGCAGGTTT TGCTGTTTGG
TCAGCGATGA TGCCGATAGA ACGTAGCCGC ATTTTATTAA AAGCTGTTGC CCTACTACGT
GAACAAAATG ATGAACTTGC TGCTGGCGAA GTATTGGATA CGGGTAAGCC ATGGCAAGAA
GCCTCGGTTG TCGATATCGT TACTGGCGCC GACTCTATTG AGTTTTTTGC CGGTCTAGCC
CCAAGTATTG AAGGCAATCA ACAACCTGTT GGAGCGGACT TTTATTATAC TCGCCGTGAG
CCATTAGGTA TTTGTGCCGG TATTGGCGCA TGGAACTACC CGTTACAAAT TGCTTGTTGG
AAAGCAGCCC CTGCACTTGC TTGCGGCAAC GTAATGATTT TTAAACCTTC AGAAGAAACA
CCTCGTGGCG CAATGCGTTT GGCTGAAATA TTCACTCAAG CGGGTGTGCC AGATGGCGTG
TTTAACGTTG TTCAAGGTGA CGGTAGAGTT GGCGCATGGC TAACCACCAA TGAAGATATC
GCTAAGGTGT CATTTACGGG CGAAGTCGGA ACAGGTAAAA AAGTCATGGC CGCTGCAGCG
GGTTCACTAA AAGAAGTGAC CATGGAGTTA GGCGGAAAGT CGCCATTGAT TATCTTTAAC
GATGCCGATG TAGAAAATGC GGTATCAGCC GCGATGTTAG CTAATTTCTA TACTCAAGGT
GAAGTGTGTA CCAACGGTAC TCGCGTATTT GTGCAGCAAG ATATTTATCC GCGCTTTATC
CAACGTTTAA AAGAACGTAC TGAGCAAAAC ATCGTTTGTG GCGACCCAAT GCACCCTGAC
ACCAATTTTG GTGCATTGAT ATCACGCGAC CATCAACAAA AAGTACTCGA CTACATTGAA
ATCGGTAAAA AAGAAGGCGC CACCTTATTA ACAGGCGGAA CAGCATTAAC GCCTGACAAT
GCACCTAATG GTTTCTTTGT GGCACCGACG GTATTTACAG ATTGCACTGA TGAGATGACG
ATTTCAAAAG AAGAAATATT TGGCCCTGTG ATGTCAGTAT TTACCTTTAC TGATGAAGAT
GAAGTTGTTA AGCGTGCCAA TAGTACTCAC CTAGGCTTAG CGGCAGGGGT ATTTACGCAA
GACATTACCC GTGCACATCG CGTTATTCAT CAAATGCAAG CCGGTATTTG TTGGATAAAT
GCTTATGGTG CCTCTCCTGC AGAAATGCCG GTTGGTGGTT ACAAGATGTC TGGTATTGGT
CGTGAGAATG GCTCTGAAAC ATTAAAAGCA TACACCCAAA TAAAAGCTGT TTACGTTGGT
ATGCAGTCAC TTGAAAGCCC ATTTTAG
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| Protein sequence | MSSLVIYQNY IHGKYQSNGT GETFEVINPA TGDVSYLVEV ATESVQKAAI ESAKAGFAVW
SAMMPIERSR ILLKAVALLR EQNDELAAGE VLDTGKPWQE ASVVDIVTGA DSIEFFAGLA
PSIEGNQQPV GADFYYTRRE PLGICAGIGA WNYPLQIACW KAAPALACGN VMIFKPSEET
PRGAMRLAEI FTQAGVPDGV FNVVQGDGRV GAWLTTNEDI AKVSFTGEVG TGKKVMAAAA
GSLKEVTMEL GGKSPLIIFN DADVENAVSA AMLANFYTQG EVCTNGTRVF VQQDIYPRFI
QRLKERTEQN IVCGDPMHPD TNFGALISRD HQQKVLDYIE IGKKEGATLL TGGTALTPDN
APNGFFVAPT VFTDCTDEMT ISKEEIFGPV MSVFTFTDED EVVKRANSTH LGLAAGVFTQ
DITRAHRVIH QMQAGICWIN AYGASPAEMP VGGYKMSGIG RENGSETLKA YTQIKAVYVG
MQSLESPF
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