| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1938 |
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| Symbol | |
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| ID | 4278850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2298262 |
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| End bp | 2299329 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134722 |
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| Product | quinolinate synthetase |
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| Protein accession | YP_750622 |
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| Protein GI | 114563109 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0379] Quinolinate synthase |
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| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.43657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTGT CGGCACCTAG AATTGAAATG ATTGAATATC CGTTTCCGCC AAAACCTGCC
GTGTTGTCTG ACGTTGAGAA AGCACAATAT AAAGCACGTA TTAAACAGCT ATTGATTGAT
CAAAACGCGG TACTTGTTGC CCATTATTAT ACTGATCCTG AAATCCAAGC GTTAGCTGAA
GAGACGGGCG GTTGCGTGTC TGATTCTCTG GAAATGGCAC GCTTCGGTCG CGATCACCCC
GCAAAGACAT TAATTGTTGC TGGGGTTAAG TTTATGGGCG AAACCGCTAA AATATTAAGC
CCAGAAAAAA CCATTTTAAT GCCAACCCTA GAAGCAACCT GCTCATTAGA TTTAGGTTGT
CCAATTGAGC AGTTCAATGA ATTTTGCGAT GCGCATCCAG ATCATACTGT CGTGGTATAT
GCCAATACCT CAGCAGCAGT AAAAGCCCGC GCAGATTGGG TTGTCACCTC CAGTATTGCG
TTAGAAATTG TTGAGCATCT CGATAGCCAG GATAAAAAAA TTATCTGGGC ACCCGATCGT
CACTTAGGTT CGTATATCAA CACACAAACT GGCGCTGACA TGTTGTTATG GCAGGGCGAA
TGTATTGTGC ATGATGAGTT TCAAGCCAAA GCACTTCGTG AGCTTAAAAA ACAGCATCCT
ACGGCGGCGA TTCTAGTACA CCCAGAATCA CCTGCCAGTG TAGTAGAACT TGCTGATGCT
GTCGGCTCTA CCAGTCAGTT AATTAAAGCC GCGCAAACCA TGCCTAACGA TACCTTTATC
GTTGCGACAG ATCGCGGTAT TTTTTATAAA ATGCAGCAAG CAGCGCCAGG TAAAACCTTG
CTCGAAGCCC CAACTGGCGG CAACGGTGCC ACCTGTAAAA GTTGTGCCCA TTGCCCGTGG
ATGGCCATGA ACGGTTTGCA AGCTATTGAA GCTTCATTAG TCGATAGCGA TAAAACTAAT
CATGAAATAT TTGTGGATGA AGAACTGCGT ATCAAAGCTC TCATCCCACT CACACGCATG
CTTGATTTTG CTAAAGAATT GAACATGAAA GTGAAGGGCA ACGCCTAA
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| Protein sequence | MSLSAPRIEM IEYPFPPKPA VLSDVEKAQY KARIKQLLID QNAVLVAHYY TDPEIQALAE
ETGGCVSDSL EMARFGRDHP AKTLIVAGVK FMGETAKILS PEKTILMPTL EATCSLDLGC
PIEQFNEFCD AHPDHTVVVY ANTSAAVKAR ADWVVTSSIA LEIVEHLDSQ DKKIIWAPDR
HLGSYINTQT GADMLLWQGE CIVHDEFQAK ALRELKKQHP TAAILVHPES PASVVELADA
VGSTSQLIKA AQTMPNDTFI VATDRGIFYK MQQAAPGKTL LEAPTGGNGA TCKSCAHCPW
MAMNGLQAIE ASLVDSDKTN HEIFVDEELR IKALIPLTRM LDFAKELNMK VKGNA
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