| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1917 |
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| Symbol | |
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| ID | 4278829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2267196 |
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| End bp | 2269412 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134701 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_750601 |
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| Protein GI | 114563088 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.151995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATTTT TAGTGATAAA GGAACCTATC ATGGACAAAG CACAACATAC CCAAGGCAAG
TGCCCAGTAG CTCACGGTGG CAATACCACA GTCGCAAGCG ACGTAATGGA ATGGTGGCCT
AATGCACTTA ATCTCGATAT TCTTCACCAG CATGACAATA AAACCAATCC AATGGATCCA
AATTTCGATT ATCGCGAAGC TTTTAAAAGC CTCGACCTGT CTGCGGTAAA ACAAGATCTT
CGCGCGTTAA TGACTGATAG TAAAGATTGG TGGCCTGCCG ACTGGGGCCA TTATGGCGGT
CTGATGATCC GTATGGCTTG GCACTCTGCT GGAACTTATC GTATGGCAGA TGGACGCGGC
GGTGCTGGAA CCGGTAATCA ACGCTTTGCG CCCCTCAACA GCTGGCCAGA TAATGCCAAT
TTAGACAAAG CACGTAGATT ACTGTGGCCA ATTAAAAAGA AATATGGCAA TAAGTTATCT
TGGGCAGATT TAATCATACT CGCAGGTACT ATTGCTTATG AATCAATGGG CTTAAAAACC
TTTGGTTTTG CTGGTGGCCG TGCTGATATT TGGCATCCAG AAAAAGATAT TTACTGGGGT
TCAGAAAAAC AATGGCTGGC AGCAAGCGAC GCTGAAAATA GTCGTTACTC TGGACAACGC
GACCTTGAAA ATCCATTAGC TGCTGTGATG ATGGGGTTAA TTTATGTCAA CCCTGAAGGT
GTAGATGGTC AACCGGATCC GTTAAAAACT GCACAAGACA TTCGTGTCAC CTTTGAACGC
ATGGCAATGA ATGACGAAGA AACTGTCGCC CTTACTGCTG GTGGACACAC TGTCGGTAAA
TGTCACGGTA ATGGTCGAGC AGAAAACCTC GAAGCCGCTC CAGAAGGCGC AGAGCTTGAA
GACCAAGGTT TAGGTTGGTT AAACAAAACA AGCCGCGGTA TTGGCCGCGA TACTGTAACA
AGTGGTATTG AAGGCGCTTG GACAACCCAT CCAACACAGT GGGACAATGG TTACTTTGAG
TTATTGCTTA ATTACGATTG GGAACTTAAA AAGAGTCCTG CAGGTGCTTG GCAATGGCAG
CCTATCAATA TTAAAGAAGA ACATAAGCCT GTTGATGTTG AAGACCCTTC GATTCGCCTA
AGTCCTATTA TGACAGACGC TGATATGGCG ATGAAAATGG ACCCTGAATA TCGAAAAATT
TCAGATCGCT TTTATCAAGA TCCAGCTTAC TTCTCCGAGG TATTTGCCCG AGCTTGGTTT
AAATTAACCC ATCGTGATTT AGGCCCTAAA AGTCGCTATC TTGGAACTGA TGTTCCCGCT
GAAGAGTTAA TTTGGCAGGA CCCTATTCCA CAAGTTGATT ACAGCTTAAC TGAACAAGAA
GTTACCGATA TTAAGGCTAA AATCTTGGCC AGTGGATTAA GTATTGCTCA ACTTGTTGCT
ACCGCTTGGG ACAGCGCCCG CACTTTCCGT GGCTCAGATT TTCGTGGCGG AGCAAACGGT
GCTCGTATTC GCTTAGCGCC ACAGAAAGAC TGGCAAGGCA ATGAGCCGGC AAGATTACAA
AAAGTATTAG CCGTGTTAGC GACTATTCAA GCAGGCTTAA CTAAATCTGT CAGTATTGCA
GACTTAATTG TACTCGGCGG CACTGCTGCA GTAGAAAAAG CAGCTCATGC GGCTGGTGTT
CACGTTAAGG TGCCTTTTGC CGCTGGTCGC GGTGACTCAA CCCTAGCACA AACAGATGTT
GAATCTTTTG ACGTATTAGA GCCTCTACAC GATGCATTTA GAAACTGGCA AAAGAAAGAC
TATGTTGTTC AGCCAGAAGA AATGATGCTC GACCGTACCC AATTAATGGG ACTAACCGCG
CATGAAATGA CGGTATTGGT GGGTGGTATG CGAGTATTAG GTGCCAACTA CGACAACAGC
AAACATGGCG TATTTACCGA CAATGTTGGT GTGTTATCAA ATGACTTTTT TGTCAACTTA
ACTGATATGT CGTATAACTG GAAACCTGCA GGTAAAAACC TTTATCACAT CGTGGATCGC
AGCACCGATA AAGTGAAATG GACTGCAACC CGAGTCGATT TAGTCTTTGG TTCAAACTCT
ATTTTACGTT CGTATGCAGA GATTTATGCG CAAGACGACG CAAAAGAGAA GTTTGTTAAC
GATTTCGTTA AAACATGGAC TAAAGTAATG AATGCAGATA GGTTTGATCT TATGTAA
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| Protein sequence | MLFLVIKEPI MDKAQHTQGK CPVAHGGNTT VASDVMEWWP NALNLDILHQ HDNKTNPMDP
NFDYREAFKS LDLSAVKQDL RALMTDSKDW WPADWGHYGG LMIRMAWHSA GTYRMADGRG
GAGTGNQRFA PLNSWPDNAN LDKARRLLWP IKKKYGNKLS WADLIILAGT IAYESMGLKT
FGFAGGRADI WHPEKDIYWG SEKQWLAASD AENSRYSGQR DLENPLAAVM MGLIYVNPEG
VDGQPDPLKT AQDIRVTFER MAMNDEETVA LTAGGHTVGK CHGNGRAENL EAAPEGAELE
DQGLGWLNKT SRGIGRDTVT SGIEGAWTTH PTQWDNGYFE LLLNYDWELK KSPAGAWQWQ
PINIKEEHKP VDVEDPSIRL SPIMTDADMA MKMDPEYRKI SDRFYQDPAY FSEVFARAWF
KLTHRDLGPK SRYLGTDVPA EELIWQDPIP QVDYSLTEQE VTDIKAKILA SGLSIAQLVA
TAWDSARTFR GSDFRGGANG ARIRLAPQKD WQGNEPARLQ KVLAVLATIQ AGLTKSVSIA
DLIVLGGTAA VEKAAHAAGV HVKVPFAAGR GDSTLAQTDV ESFDVLEPLH DAFRNWQKKD
YVVQPEEMML DRTQLMGLTA HEMTVLVGGM RVLGANYDNS KHGVFTDNVG VLSNDFFVNL
TDMSYNWKPA GKNLYHIVDR STDKVKWTAT RVDLVFGSNS ILRSYAEIYA QDDAKEKFVN
DFVKTWTKVM NADRFDLM
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