Gene Sfri_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1916 
Symbol 
ID4278828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2266708 
End bp2267115 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content37% 
IMG OID638134700 
Producthypothetical protein 
Protein accessionYP_750600 
Protein GI114563087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.024506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT ACCTTTCACT TATCACGCTA TCACTTTTTA TTACGGCGGG TTGCCAAACC 
CAGCCTGAGA TCGCTACATT GCCTGAAGCT ACTTTTAATC ATGATATCGT TATTATTAAT
TCTGCTCAGT TAAATCAATA TTGGTCACCA CAAACATTAA AACCTGTGAT GTTAAATAAA
AGACCTGATT GGCTACCTAA AGGTGCTGGT AAAGGTGAAT ATTATCAAAC GATTGATTCA
AATGGTAATG AAGTCAGCAA AACGTTAATT AGCTCAACAC CAGAAGGTTG GATGACACAG
GCATTGTTGA ATAAAATGCC TAAACAGCAG TTTAAGCCTA CCGCGCAAAA TGACAAGCGG
CTTCCGGTTA AAGTGAAATT AGAATTTGAA GTGAAGCGGA TGAATTAA
 
Protein sequence
MKKYLSLITL SLFITAGCQT QPEIATLPEA TFNHDIVIIN SAQLNQYWSP QTLKPVMLNK 
RPDWLPKGAG KGEYYQTIDS NGNEVSKTLI SSTPEGWMTQ ALLNKMPKQQ FKPTAQNDKR
LPVKVKLEFE VKRMN